Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26203 | 78832;78833;78834 | chr2:178567525;178567524;178567523 | chr2:179432252;179432251;179432250 |
N2AB | 24562 | 73909;73910;73911 | chr2:178567525;178567524;178567523 | chr2:179432252;179432251;179432250 |
N2A | 23635 | 71128;71129;71130 | chr2:178567525;178567524;178567523 | chr2:179432252;179432251;179432250 |
N2B | 17138 | 51637;51638;51639 | chr2:178567525;178567524;178567523 | chr2:179432252;179432251;179432250 |
Novex-1 | 17263 | 52012;52013;52014 | chr2:178567525;178567524;178567523 | chr2:179432252;179432251;179432250 |
Novex-2 | 17330 | 52213;52214;52215 | chr2:178567525;178567524;178567523 | chr2:179432252;179432251;179432250 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs766839297 | None | 0.684 | N | 0.439 | 0.423 | 0.70159519113 | gnomAD-4.0.0 | 1.59545E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44155E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4598 | ambiguous | 0.459 | ambiguous | -2.261 | Highly Destabilizing | 0.543 | D | 0.407 | neutral | None | None | None | None | I |
I/C | 0.8316 | likely_pathogenic | 0.8344 | pathogenic | -1.711 | Destabilizing | 0.996 | D | 0.405 | neutral | None | None | None | None | I |
I/D | 0.9519 | likely_pathogenic | 0.9577 | pathogenic | -2.04 | Highly Destabilizing | 0.984 | D | 0.539 | neutral | None | None | None | None | I |
I/E | 0.858 | likely_pathogenic | 0.8643 | pathogenic | -1.877 | Destabilizing | 0.953 | D | 0.544 | neutral | None | None | None | None | I |
I/F | 0.2773 | likely_benign | 0.2851 | benign | -1.327 | Destabilizing | 0.007 | N | 0.285 | neutral | N | 0.506750007 | None | None | I |
I/G | 0.9091 | likely_pathogenic | 0.9153 | pathogenic | -2.75 | Highly Destabilizing | 0.953 | D | 0.538 | neutral | None | None | None | None | I |
I/H | 0.8093 | likely_pathogenic | 0.817 | pathogenic | -1.971 | Destabilizing | 0.996 | D | 0.525 | neutral | None | None | None | None | I |
I/K | 0.7221 | likely_pathogenic | 0.7373 | pathogenic | -1.906 | Destabilizing | 0.953 | D | 0.544 | neutral | None | None | None | None | I |
I/L | 0.119 | likely_benign | 0.1234 | benign | -0.899 | Destabilizing | 0.001 | N | 0.086 | neutral | N | 0.452595818 | None | None | I |
I/M | 0.1278 | likely_benign | 0.1258 | benign | -0.845 | Destabilizing | 0.884 | D | 0.431 | neutral | D | 0.526864291 | None | None | I |
I/N | 0.766 | likely_pathogenic | 0.7834 | pathogenic | -2.085 | Highly Destabilizing | 0.979 | D | 0.551 | neutral | N | 0.514093841 | None | None | I |
I/P | 0.9487 | likely_pathogenic | 0.9577 | pathogenic | -1.328 | Destabilizing | 0.984 | D | 0.549 | neutral | None | None | None | None | I |
I/Q | 0.7712 | likely_pathogenic | 0.7684 | pathogenic | -2.022 | Highly Destabilizing | 0.984 | D | 0.538 | neutral | None | None | None | None | I |
I/R | 0.6472 | likely_pathogenic | 0.6697 | pathogenic | -1.487 | Destabilizing | 0.953 | D | 0.545 | neutral | None | None | None | None | I |
I/S | 0.6778 | likely_pathogenic | 0.6912 | pathogenic | -2.801 | Highly Destabilizing | 0.815 | D | 0.513 | neutral | N | 0.498102727 | None | None | I |
I/T | 0.3235 | likely_benign | 0.3322 | benign | -2.488 | Highly Destabilizing | 0.684 | D | 0.439 | neutral | N | 0.511337478 | None | None | I |
I/V | 0.0634 | likely_benign | 0.0641 | benign | -1.328 | Destabilizing | 0.164 | N | 0.299 | neutral | N | 0.412034488 | None | None | I |
I/W | 0.8909 | likely_pathogenic | 0.8951 | pathogenic | -1.556 | Destabilizing | 0.996 | D | 0.534 | neutral | None | None | None | None | I |
I/Y | 0.7548 | likely_pathogenic | 0.7634 | pathogenic | -1.303 | Destabilizing | 0.835 | D | 0.448 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.