Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26214 | 78865;78866;78867 | chr2:178567492;178567491;178567490 | chr2:179432219;179432218;179432217 |
N2AB | 24573 | 73942;73943;73944 | chr2:178567492;178567491;178567490 | chr2:179432219;179432218;179432217 |
N2A | 23646 | 71161;71162;71163 | chr2:178567492;178567491;178567490 | chr2:179432219;179432218;179432217 |
N2B | 17149 | 51670;51671;51672 | chr2:178567492;178567491;178567490 | chr2:179432219;179432218;179432217 |
Novex-1 | 17274 | 52045;52046;52047 | chr2:178567492;178567491;178567490 | chr2:179432219;179432218;179432217 |
Novex-2 | 17341 | 52246;52247;52248 | chr2:178567492;178567491;178567490 | chr2:179432219;179432218;179432217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs944710014 | -0.119 | 0.977 | N | 0.581 | 0.46 | 0.378847511475 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs944710014 | -0.119 | 0.977 | N | 0.581 | 0.46 | 0.378847511475 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs944710014 | -0.119 | 0.977 | N | 0.581 | 0.46 | 0.378847511475 | gnomAD-4.0.0 | 4.33978E-06 | None | None | None | None | N | None | 8.01218E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47823E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2314 | likely_benign | 0.2406 | benign | -0.487 | Destabilizing | 0.977 | D | 0.666 | neutral | D | 0.534040979 | None | None | N |
E/C | 0.8763 | likely_pathogenic | 0.8928 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/D | 0.1607 | likely_benign | 0.1463 | benign | -1.351 | Destabilizing | 0.117 | N | 0.287 | neutral | N | 0.459967295 | None | None | N |
E/F | 0.8223 | likely_pathogenic | 0.8476 | pathogenic | 0.378 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/G | 0.3507 | ambiguous | 0.3558 | ambiguous | -0.924 | Destabilizing | 0.993 | D | 0.697 | prob.neutral | N | 0.514436236 | None | None | N |
E/H | 0.618 | likely_pathogenic | 0.658 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/I | 0.4641 | ambiguous | 0.4903 | ambiguous | 0.721 | Stabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
E/K | 0.3988 | ambiguous | 0.4475 | ambiguous | -0.757 | Destabilizing | 0.977 | D | 0.581 | neutral | N | 0.498600254 | None | None | N |
E/L | 0.5214 | ambiguous | 0.5409 | ambiguous | 0.721 | Stabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
E/M | 0.5687 | likely_pathogenic | 0.5875 | pathogenic | 1.088 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/N | 0.4109 | ambiguous | 0.4204 | ambiguous | -1.312 | Destabilizing | 0.99 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/P | 0.8708 | likely_pathogenic | 0.8665 | pathogenic | 0.341 | Stabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
E/Q | 0.2393 | likely_benign | 0.2598 | benign | -1.07 | Destabilizing | 0.997 | D | 0.663 | neutral | N | 0.52022632 | None | None | N |
E/R | 0.5427 | ambiguous | 0.5901 | pathogenic | -0.464 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
E/S | 0.3022 | likely_benign | 0.3152 | benign | -1.664 | Destabilizing | 0.983 | D | 0.615 | neutral | None | None | None | None | N |
E/T | 0.325 | likely_benign | 0.3413 | ambiguous | -1.292 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
E/V | 0.262 | likely_benign | 0.2752 | benign | 0.341 | Stabilizing | 0.997 | D | 0.773 | deleterious | N | 0.492964619 | None | None | N |
E/W | 0.93 | likely_pathogenic | 0.9404 | pathogenic | 0.567 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/Y | 0.7422 | likely_pathogenic | 0.7776 | pathogenic | 0.609 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.