Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26216 | 78871;78872;78873 | chr2:178567486;178567485;178567484 | chr2:179432213;179432212;179432211 |
N2AB | 24575 | 73948;73949;73950 | chr2:178567486;178567485;178567484 | chr2:179432213;179432212;179432211 |
N2A | 23648 | 71167;71168;71169 | chr2:178567486;178567485;178567484 | chr2:179432213;179432212;179432211 |
N2B | 17151 | 51676;51677;51678 | chr2:178567486;178567485;178567484 | chr2:179432213;179432212;179432211 |
Novex-1 | 17276 | 52051;52052;52053 | chr2:178567486;178567485;178567484 | chr2:179432213;179432212;179432211 |
Novex-2 | 17343 | 52252;52253;52254 | chr2:178567486;178567485;178567484 | chr2:179432213;179432212;179432211 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.684 | N | 0.624 | 0.415 | 0.54038131941 | gnomAD-4.0.0 | 1.5929E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86054E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3705 | ambiguous | 0.3308 | benign | -0.348 | Destabilizing | 0.309 | N | 0.562 | neutral | N | 0.489940698 | None | None | N |
D/C | 0.8752 | likely_pathogenic | 0.8421 | pathogenic | -0.204 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | N |
D/E | 0.4724 | ambiguous | 0.4277 | ambiguous | -0.731 | Destabilizing | 0.472 | N | 0.458 | neutral | N | 0.501464414 | None | None | N |
D/F | 0.8277 | likely_pathogenic | 0.7902 | pathogenic | -0.123 | Destabilizing | 0.984 | D | 0.664 | neutral | None | None | None | None | N |
D/G | 0.4959 | ambiguous | 0.4453 | ambiguous | -0.683 | Destabilizing | 0.003 | N | 0.257 | neutral | N | 0.501120484 | None | None | N |
D/H | 0.6059 | likely_pathogenic | 0.5614 | ambiguous | -0.578 | Destabilizing | 0.994 | D | 0.581 | neutral | N | 0.50023505 | None | None | N |
D/I | 0.6289 | likely_pathogenic | 0.5944 | pathogenic | 0.525 | Stabilizing | 0.91 | D | 0.651 | neutral | None | None | None | None | N |
D/K | 0.7868 | likely_pathogenic | 0.7383 | pathogenic | -0.538 | Destabilizing | 0.742 | D | 0.559 | neutral | None | None | None | None | N |
D/L | 0.6653 | likely_pathogenic | 0.6262 | pathogenic | 0.525 | Stabilizing | 0.742 | D | 0.625 | neutral | None | None | None | None | N |
D/M | 0.8148 | likely_pathogenic | 0.7792 | pathogenic | 0.888 | Stabilizing | 0.996 | D | 0.645 | neutral | None | None | None | None | N |
D/N | 0.2258 | likely_benign | 0.2037 | benign | -0.823 | Destabilizing | 0.684 | D | 0.466 | neutral | D | 0.529709808 | None | None | N |
D/P | 0.9705 | likely_pathogenic | 0.9633 | pathogenic | 0.26 | Stabilizing | 0.953 | D | 0.594 | neutral | None | None | None | None | N |
D/Q | 0.7271 | likely_pathogenic | 0.6844 | pathogenic | -0.676 | Destabilizing | 0.953 | D | 0.521 | neutral | None | None | None | None | N |
D/R | 0.7835 | likely_pathogenic | 0.7447 | pathogenic | -0.426 | Destabilizing | 0.953 | D | 0.622 | neutral | None | None | None | None | N |
D/S | 0.2993 | likely_benign | 0.2718 | benign | -1.048 | Destabilizing | 0.045 | N | 0.177 | neutral | None | None | None | None | N |
D/T | 0.4971 | ambiguous | 0.4594 | ambiguous | -0.787 | Destabilizing | 0.037 | N | 0.295 | neutral | None | None | None | None | N |
D/V | 0.4205 | ambiguous | 0.39 | ambiguous | 0.26 | Stabilizing | 0.684 | D | 0.624 | neutral | N | 0.519436886 | None | None | N |
D/W | 0.9613 | likely_pathogenic | 0.9512 | pathogenic | -0.066 | Destabilizing | 0.996 | D | 0.692 | prob.neutral | None | None | None | None | N |
D/Y | 0.4643 | ambiguous | 0.4238 | ambiguous | 0.059 | Stabilizing | 0.979 | D | 0.657 | neutral | N | 0.494290838 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.