Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26222 | 78889;78890;78891 | chr2:178567468;178567467;178567466 | chr2:179432195;179432194;179432193 |
N2AB | 24581 | 73966;73967;73968 | chr2:178567468;178567467;178567466 | chr2:179432195;179432194;179432193 |
N2A | 23654 | 71185;71186;71187 | chr2:178567468;178567467;178567466 | chr2:179432195;179432194;179432193 |
N2B | 17157 | 51694;51695;51696 | chr2:178567468;178567467;178567466 | chr2:179432195;179432194;179432193 |
Novex-1 | 17282 | 52069;52070;52071 | chr2:178567468;178567467;178567466 | chr2:179432195;179432194;179432193 |
Novex-2 | 17349 | 52270;52271;52272 | chr2:178567468;178567467;178567466 | chr2:179432195;179432194;179432193 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs1470470841 | None | 0.939 | N | 0.516 | 0.542 | 0.74021432234 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/R | rs1470470841 | None | 0.939 | N | 0.516 | 0.542 | 0.74021432234 | gnomAD-4.0.0 | 1.31524E-05 | None | None | None | None | N | None | 4.82649E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2638 | likely_benign | 0.2609 | benign | -1.093 | Destabilizing | 0.543 | D | 0.359 | neutral | None | None | None | None | N |
L/C | 0.5918 | likely_pathogenic | 0.5659 | pathogenic | -0.676 | Destabilizing | 0.996 | D | 0.451 | neutral | None | None | None | None | N |
L/D | 0.776 | likely_pathogenic | 0.7798 | pathogenic | -0.197 | Destabilizing | 0.984 | D | 0.521 | neutral | None | None | None | None | N |
L/E | 0.4777 | ambiguous | 0.48 | ambiguous | -0.226 | Destabilizing | 0.984 | D | 0.519 | neutral | None | None | None | None | N |
L/F | 0.1915 | likely_benign | 0.1934 | benign | -0.774 | Destabilizing | 0.02 | N | 0.183 | neutral | None | None | None | None | N |
L/G | 0.6803 | likely_pathogenic | 0.6775 | pathogenic | -1.352 | Destabilizing | 0.953 | D | 0.497 | neutral | None | None | None | None | N |
L/H | 0.3448 | ambiguous | 0.3318 | benign | -0.546 | Destabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | N |
L/I | 0.0814 | likely_benign | 0.0855 | benign | -0.491 | Destabilizing | 0.003 | N | 0.089 | neutral | N | 0.439359949 | None | None | N |
L/K | 0.3439 | ambiguous | 0.34 | benign | -0.604 | Destabilizing | 0.953 | D | 0.505 | neutral | None | None | None | None | N |
L/M | 0.118 | likely_benign | 0.1237 | benign | -0.477 | Destabilizing | 0.373 | N | 0.286 | neutral | None | None | None | None | N |
L/N | 0.4558 | ambiguous | 0.458 | ambiguous | -0.401 | Destabilizing | 0.984 | D | 0.522 | neutral | None | None | None | None | N |
L/P | 0.2089 | likely_benign | 0.201 | benign | -0.659 | Destabilizing | 0.979 | D | 0.523 | neutral | N | 0.465890403 | None | None | N |
L/Q | 0.2346 | likely_benign | 0.2386 | benign | -0.553 | Destabilizing | 0.939 | D | 0.516 | neutral | N | 0.491882138 | None | None | N |
L/R | 0.2839 | likely_benign | 0.278 | benign | -0.089 | Destabilizing | 0.939 | D | 0.516 | neutral | N | 0.48472688 | None | None | N |
L/S | 0.3303 | likely_benign | 0.3352 | benign | -0.985 | Destabilizing | 0.953 | D | 0.481 | neutral | None | None | None | None | N |
L/T | 0.2696 | likely_benign | 0.2587 | benign | -0.894 | Destabilizing | 0.742 | D | 0.405 | neutral | None | None | None | None | N |
L/V | 0.0879 | likely_benign | 0.0911 | benign | -0.659 | Destabilizing | 0.028 | N | 0.117 | neutral | N | 0.443514975 | None | None | N |
L/W | 0.396 | ambiguous | 0.3852 | ambiguous | -0.811 | Destabilizing | 0.996 | D | 0.531 | neutral | None | None | None | None | N |
L/Y | 0.436 | ambiguous | 0.4173 | ambiguous | -0.578 | Destabilizing | 0.835 | D | 0.463 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.