Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26226 | 78901;78902;78903 | chr2:178567456;178567455;178567454 | chr2:179432183;179432182;179432181 |
N2AB | 24585 | 73978;73979;73980 | chr2:178567456;178567455;178567454 | chr2:179432183;179432182;179432181 |
N2A | 23658 | 71197;71198;71199 | chr2:178567456;178567455;178567454 | chr2:179432183;179432182;179432181 |
N2B | 17161 | 51706;51707;51708 | chr2:178567456;178567455;178567454 | chr2:179432183;179432182;179432181 |
Novex-1 | 17286 | 52081;52082;52083 | chr2:178567456;178567455;178567454 | chr2:179432183;179432182;179432181 |
Novex-2 | 17353 | 52282;52283;52284 | chr2:178567456;178567455;178567454 | chr2:179432183;179432182;179432181 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1251054791 | -1.164 | 0.285 | N | 0.404 | 0.06 | 0.211220785272 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.56E-05 | None | 0 | 0 | 0 |
E/D | rs1251054791 | -1.164 | 0.285 | N | 0.404 | 0.06 | 0.211220785272 | gnomAD-4.0.0 | 2.05362E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.48489E-05 | 0 |
E/K | rs754878387 | -0.557 | 0.001 | N | 0.152 | 0.255 | 0.266385636622 | gnomAD-2.1.1 | 5.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.41023E-04 | 1.56E-05 | 1.40924E-04 |
E/K | rs754878387 | -0.557 | 0.001 | N | 0.152 | 0.255 | 0.266385636622 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.42E-05 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs754878387 | -0.557 | 0.001 | N | 0.152 | 0.255 | 0.266385636622 | gnomAD-4.0.0 | 1.98402E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 4.06415E-04 | 0 | 2.54365E-06 | 0 | 4.80554E-05 |
E/Q | rs754878387 | -0.791 | 0.002 | N | 0.11 | 0.096 | None | gnomAD-2.1.1 | 6.8E-05 | None | None | None | None | N | None | 0 | 2.83672E-04 | None | 2.9098E-04 | 0 | None | 0 | None | 0 | 3.91E-05 | 1.40924E-04 |
E/Q | rs754878387 | -0.791 | 0.002 | N | 0.11 | 0.096 | None | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 0 | 1.96567E-04 | 0 | 8.65052E-04 | 0 | None | 0 | 3.16456E-03 | 1.47E-05 | 0 | 0 |
E/Q | rs754878387 | -0.791 | 0.002 | N | 0.11 | 0.096 | None | gnomAD-4.0.0 | 4.15375E-05 | None | None | None | None | N | None | 0 | 2.66845E-04 | None | 3.72024E-04 | 0 | None | 0 | 4.96032E-04 | 2.54367E-05 | 0 | 1.1209E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1367 | likely_benign | 0.1218 | benign | -0.728 | Destabilizing | 0.001 | N | 0.239 | neutral | N | 0.491674282 | None | None | N |
E/C | 0.6701 | likely_pathogenic | 0.6139 | pathogenic | -0.523 | Destabilizing | 0.972 | D | 0.541 | neutral | None | None | None | None | N |
E/D | 0.2386 | likely_benign | 0.1877 | benign | -1.191 | Destabilizing | 0.285 | N | 0.404 | neutral | N | 0.494887945 | None | None | N |
E/F | 0.6399 | likely_pathogenic | 0.5674 | pathogenic | -0.004 | Destabilizing | 0.818 | D | 0.562 | neutral | None | None | None | None | N |
E/G | 0.2397 | likely_benign | 0.1968 | benign | -1.127 | Destabilizing | 0.166 | N | 0.511 | neutral | N | 0.485620785 | None | None | N |
E/H | 0.3065 | likely_benign | 0.256 | benign | -0.305 | Destabilizing | 0.901 | D | 0.476 | neutral | None | None | None | None | N |
E/I | 0.2119 | likely_benign | 0.1944 | benign | 0.371 | Stabilizing | 0.39 | N | 0.577 | neutral | None | None | None | None | N |
E/K | 0.1154 | likely_benign | 0.1042 | benign | -0.732 | Destabilizing | 0.001 | N | 0.152 | neutral | N | 0.445632561 | None | None | N |
E/L | 0.2757 | likely_benign | 0.2393 | benign | 0.371 | Stabilizing | 0.083 | N | 0.503 | neutral | None | None | None | None | N |
E/M | 0.3105 | likely_benign | 0.281 | benign | 0.737 | Stabilizing | 0.103 | N | 0.433 | neutral | None | None | None | None | N |
E/N | 0.2822 | likely_benign | 0.2284 | benign | -1.257 | Destabilizing | 0.561 | D | 0.393 | neutral | None | None | None | None | N |
E/P | 0.9758 | likely_pathogenic | 0.9597 | pathogenic | 0.027 | Stabilizing | 0.722 | D | 0.557 | neutral | None | None | None | None | N |
E/Q | 0.0831 | likely_benign | 0.0789 | benign | -1.076 | Destabilizing | 0.002 | N | 0.11 | neutral | N | 0.397129325 | None | None | N |
E/R | 0.1899 | likely_benign | 0.1646 | benign | -0.415 | Destabilizing | 0.209 | N | 0.388 | neutral | None | None | None | None | N |
E/S | 0.1556 | likely_benign | 0.1322 | benign | -1.587 | Destabilizing | 0.209 | N | 0.373 | neutral | None | None | None | None | N |
E/T | 0.1251 | likely_benign | 0.1112 | benign | -1.253 | Destabilizing | 0.345 | N | 0.495 | neutral | None | None | None | None | N |
E/V | 0.1377 | likely_benign | 0.1292 | benign | 0.027 | Stabilizing | 0.166 | N | 0.515 | neutral | N | 0.448558223 | None | None | N |
E/W | 0.8589 | likely_pathogenic | 0.8004 | pathogenic | 0.231 | Stabilizing | 0.991 | D | 0.553 | neutral | None | None | None | None | N |
E/Y | 0.5469 | ambiguous | 0.4663 | ambiguous | 0.241 | Stabilizing | 0.901 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.