Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26233 | 78922;78923;78924 | chr2:178567435;178567434;178567433 | chr2:179432162;179432161;179432160 |
N2AB | 24592 | 73999;74000;74001 | chr2:178567435;178567434;178567433 | chr2:179432162;179432161;179432160 |
N2A | 23665 | 71218;71219;71220 | chr2:178567435;178567434;178567433 | chr2:179432162;179432161;179432160 |
N2B | 17168 | 51727;51728;51729 | chr2:178567435;178567434;178567433 | chr2:179432162;179432161;179432160 |
Novex-1 | 17293 | 52102;52103;52104 | chr2:178567435;178567434;178567433 | chr2:179432162;179432161;179432160 |
Novex-2 | 17360 | 52303;52304;52305 | chr2:178567435;178567434;178567433 | chr2:179432162;179432161;179432160 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs267599036 | 0.165 | 0.892 | N | 0.534 | 0.371 | 0.51196500227 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 2.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs267599036 | 0.165 | 0.892 | N | 0.534 | 0.371 | 0.51196500227 | gnomAD-4.0.0 | 1.60051E-06 | None | None | None | None | N | None | 0 | 2.31107E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1068 | likely_benign | 0.0947 | benign | -0.481 | Destabilizing | 0.805 | D | 0.524 | neutral | N | 0.491252645 | None | None | N |
E/C | 0.7246 | likely_pathogenic | 0.6569 | pathogenic | -0.319 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/D | 0.1402 | likely_benign | 0.1163 | benign | -0.542 | Destabilizing | 0.025 | N | 0.363 | neutral | N | 0.486035178 | None | None | N |
E/F | 0.5956 | likely_pathogenic | 0.5294 | ambiguous | -0.097 | Destabilizing | 0.975 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/G | 0.1642 | likely_benign | 0.1387 | benign | -0.734 | Destabilizing | 0.892 | D | 0.511 | neutral | D | 0.523310553 | None | None | N |
E/H | 0.3909 | ambiguous | 0.334 | benign | 0.084 | Stabilizing | 0.999 | D | 0.529 | neutral | None | None | None | None | N |
E/I | 0.1668 | likely_benign | 0.1492 | benign | 0.173 | Stabilizing | 0.95 | D | 0.599 | neutral | None | None | None | None | N |
E/K | 0.1151 | likely_benign | 0.1015 | benign | 0.048 | Stabilizing | 0.892 | D | 0.534 | neutral | N | 0.48742753 | None | None | N |
E/L | 0.2364 | likely_benign | 0.2102 | benign | 0.173 | Stabilizing | 0.845 | D | 0.554 | neutral | None | None | None | None | N |
E/M | 0.2718 | likely_benign | 0.2446 | benign | 0.181 | Stabilizing | 0.997 | D | 0.629 | neutral | None | None | None | None | N |
E/N | 0.1944 | likely_benign | 0.1582 | benign | -0.414 | Destabilizing | 0.95 | D | 0.509 | neutral | None | None | None | None | N |
E/P | 0.2428 | likely_benign | 0.2154 | benign | -0.024 | Destabilizing | 0.987 | D | 0.58 | neutral | None | None | None | None | N |
E/Q | 0.1268 | likely_benign | 0.1165 | benign | -0.341 | Destabilizing | 0.983 | D | 0.507 | neutral | N | 0.487542889 | None | None | N |
E/R | 0.2143 | likely_benign | 0.1885 | benign | 0.373 | Stabilizing | 0.987 | D | 0.539 | neutral | None | None | None | None | N |
E/S | 0.1858 | likely_benign | 0.1551 | benign | -0.585 | Destabilizing | 0.916 | D | 0.519 | neutral | None | None | None | None | N |
E/T | 0.1484 | likely_benign | 0.126 | benign | -0.376 | Destabilizing | 0.916 | D | 0.525 | neutral | None | None | None | None | N |
E/V | 0.1049 | likely_benign | 0.0962 | benign | -0.024 | Destabilizing | 0.056 | N | 0.365 | neutral | N | 0.485518653 | None | None | N |
E/W | 0.8284 | likely_pathogenic | 0.7728 | pathogenic | 0.124 | Stabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/Y | 0.5163 | ambiguous | 0.4433 | ambiguous | 0.155 | Stabilizing | 0.987 | D | 0.637 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.