Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26234 | 78925;78926;78927 | chr2:178567432;178567431;178567430 | chr2:179432159;179432158;179432157 |
N2AB | 24593 | 74002;74003;74004 | chr2:178567432;178567431;178567430 | chr2:179432159;179432158;179432157 |
N2A | 23666 | 71221;71222;71223 | chr2:178567432;178567431;178567430 | chr2:179432159;179432158;179432157 |
N2B | 17169 | 51730;51731;51732 | chr2:178567432;178567431;178567430 | chr2:179432159;179432158;179432157 |
Novex-1 | 17294 | 52105;52106;52107 | chr2:178567432;178567431;178567430 | chr2:179432159;179432158;179432157 |
Novex-2 | 17361 | 52306;52307;52308 | chr2:178567432;178567431;178567430 | chr2:179432159;179432158;179432157 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.042 | N | 0.377 | 0.348 | 0.540107908424 | gnomAD-4.0.0 | 1.6032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87305E-06 | 0 | 0 |
I/V | None | None | None | N | 0.118 | 0.24 | 0.0806252709748 | gnomAD-4.0.0 | 1.60302E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.42718E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4347 | ambiguous | 0.3296 | benign | -2.28 | Highly Destabilizing | None | N | 0.193 | neutral | None | None | None | None | N |
I/C | 0.8383 | likely_pathogenic | 0.7592 | pathogenic | -1.461 | Destabilizing | 0.667 | D | 0.483 | neutral | None | None | None | None | N |
I/D | 0.9563 | likely_pathogenic | 0.9263 | pathogenic | -2.207 | Highly Destabilizing | 0.667 | D | 0.521 | neutral | None | None | None | None | N |
I/E | 0.8894 | likely_pathogenic | 0.8398 | pathogenic | -2.057 | Highly Destabilizing | 0.22 | N | 0.491 | neutral | None | None | None | None | N |
I/F | 0.2633 | likely_benign | 0.1949 | benign | -1.364 | Destabilizing | 0.096 | N | 0.411 | neutral | N | 0.51942103 | None | None | N |
I/G | 0.858 | likely_pathogenic | 0.7859 | pathogenic | -2.745 | Highly Destabilizing | 0.124 | N | 0.439 | neutral | None | None | None | None | N |
I/H | 0.9041 | likely_pathogenic | 0.8327 | pathogenic | -1.954 | Destabilizing | 0.958 | D | 0.499 | neutral | None | None | None | None | N |
I/K | 0.8328 | likely_pathogenic | 0.7662 | pathogenic | -1.83 | Destabilizing | 0.22 | N | 0.488 | neutral | None | None | None | None | N |
I/L | 0.0961 | likely_benign | 0.0854 | benign | -0.982 | Destabilizing | None | N | 0.093 | neutral | N | 0.412034488 | None | None | N |
I/M | 0.1013 | likely_benign | 0.0872 | benign | -0.817 | Destabilizing | 0.427 | N | 0.462 | neutral | D | 0.53379305 | None | None | N |
I/N | 0.773 | likely_pathogenic | 0.692 | pathogenic | -1.921 | Destabilizing | 0.602 | D | 0.501 | neutral | N | 0.507589835 | None | None | N |
I/P | 0.8778 | likely_pathogenic | 0.8083 | pathogenic | -1.391 | Destabilizing | 0.667 | D | 0.522 | neutral | None | None | None | None | N |
I/Q | 0.8322 | likely_pathogenic | 0.7538 | pathogenic | -1.914 | Destabilizing | 0.667 | D | 0.503 | neutral | None | None | None | None | N |
I/R | 0.7634 | likely_pathogenic | 0.6749 | pathogenic | -1.369 | Destabilizing | 0.667 | D | 0.517 | neutral | None | None | None | None | N |
I/S | 0.6811 | likely_pathogenic | 0.5787 | pathogenic | -2.582 | Highly Destabilizing | 0.096 | N | 0.404 | neutral | D | 0.527820458 | None | None | N |
I/T | 0.3238 | likely_benign | 0.2442 | benign | -2.295 | Highly Destabilizing | 0.042 | N | 0.377 | neutral | N | 0.518284123 | None | None | N |
I/V | 0.0822 | likely_benign | 0.0717 | benign | -1.391 | Destabilizing | None | N | 0.118 | neutral | N | 0.455406837 | None | None | N |
I/W | 0.8678 | likely_pathogenic | 0.7649 | pathogenic | -1.599 | Destabilizing | 0.958 | D | 0.529 | neutral | None | None | None | None | N |
I/Y | 0.7536 | likely_pathogenic | 0.6453 | pathogenic | -1.348 | Destabilizing | 0.667 | D | 0.503 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.