Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26235 | 78928;78929;78930 | chr2:178567429;178567428;178567427 | chr2:179432156;179432155;179432154 |
N2AB | 24594 | 74005;74006;74007 | chr2:178567429;178567428;178567427 | chr2:179432156;179432155;179432154 |
N2A | 23667 | 71224;71225;71226 | chr2:178567429;178567428;178567427 | chr2:179432156;179432155;179432154 |
N2B | 17170 | 51733;51734;51735 | chr2:178567429;178567428;178567427 | chr2:179432156;179432155;179432154 |
Novex-1 | 17295 | 52108;52109;52110 | chr2:178567429;178567428;178567427 | chr2:179432156;179432155;179432154 |
Novex-2 | 17362 | 52309;52310;52311 | chr2:178567429;178567428;178567427 | chr2:179432156;179432155;179432154 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1695984178 | None | 0.983 | N | 0.573 | 0.175 | 0.299086750705 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1695984178 | None | 0.983 | N | 0.573 | 0.175 | 0.299086750705 | gnomAD-4.0.0 | 1.97254E-05 | None | None | None | None | N | None | 7.23624E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1304 | likely_benign | 0.1187 | benign | -0.003 | Destabilizing | 0.805 | D | 0.573 | neutral | N | 0.501235127 | None | None | N |
E/C | 0.7546 | likely_pathogenic | 0.7034 | pathogenic | -0.214 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
E/D | 0.1402 | likely_benign | 0.1222 | benign | -0.268 | Destabilizing | 0.892 | D | 0.503 | neutral | N | 0.519879603 | None | None | N |
E/F | 0.6607 | likely_pathogenic | 0.6093 | pathogenic | -0.029 | Destabilizing | 0.987 | D | 0.672 | neutral | None | None | None | None | N |
E/G | 0.1398 | likely_benign | 0.1261 | benign | -0.126 | Destabilizing | 0.892 | D | 0.56 | neutral | N | 0.51079876 | None | None | N |
E/H | 0.3847 | ambiguous | 0.343 | ambiguous | 0.573 | Stabilizing | 0.999 | D | 0.598 | neutral | None | None | None | None | N |
E/I | 0.2674 | likely_benign | 0.2333 | benign | 0.265 | Stabilizing | 0.975 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/K | 0.1085 | likely_benign | 0.1031 | benign | 0.389 | Stabilizing | 0.892 | D | 0.564 | neutral | N | 0.485110882 | None | None | N |
E/L | 0.2934 | likely_benign | 0.2578 | benign | 0.265 | Stabilizing | 0.95 | D | 0.613 | neutral | None | None | None | None | N |
E/M | 0.36 | ambiguous | 0.3287 | benign | 0.001 | Stabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
E/N | 0.2516 | likely_benign | 0.221 | benign | 0.167 | Stabilizing | 0.975 | D | 0.606 | neutral | None | None | None | None | N |
E/P | 0.3887 | ambiguous | 0.3405 | ambiguous | 0.194 | Stabilizing | 0.987 | D | 0.661 | neutral | None | None | None | None | N |
E/Q | 0.122 | likely_benign | 0.1141 | benign | 0.178 | Stabilizing | 0.983 | D | 0.573 | neutral | N | 0.521610399 | None | None | N |
E/R | 0.1863 | likely_benign | 0.1747 | benign | 0.647 | Stabilizing | 0.975 | D | 0.628 | neutral | None | None | None | None | N |
E/S | 0.1639 | likely_benign | 0.1487 | benign | 0.012 | Stabilizing | 0.845 | D | 0.555 | neutral | None | None | None | None | N |
E/T | 0.1514 | likely_benign | 0.138 | benign | 0.118 | Stabilizing | 0.033 | N | 0.346 | neutral | None | None | None | None | N |
E/V | 0.1542 | likely_benign | 0.1384 | benign | 0.194 | Stabilizing | 0.805 | D | 0.562 | neutral | N | 0.50343007 | None | None | N |
E/W | 0.8443 | likely_pathogenic | 0.8091 | pathogenic | 0.017 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/Y | 0.5859 | likely_pathogenic | 0.5265 | ambiguous | 0.195 | Stabilizing | 0.996 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.