Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26242 | 78949;78950;78951 | chr2:178567408;178567407;178567406 | chr2:179432135;179432134;179432133 |
N2AB | 24601 | 74026;74027;74028 | chr2:178567408;178567407;178567406 | chr2:179432135;179432134;179432133 |
N2A | 23674 | 71245;71246;71247 | chr2:178567408;178567407;178567406 | chr2:179432135;179432134;179432133 |
N2B | 17177 | 51754;51755;51756 | chr2:178567408;178567407;178567406 | chr2:179432135;179432134;179432133 |
Novex-1 | 17302 | 52129;52130;52131 | chr2:178567408;178567407;178567406 | chr2:179432135;179432134;179432133 |
Novex-2 | 17369 | 52330;52331;52332 | chr2:178567408;178567407;178567406 | chr2:179432135;179432134;179432133 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.684 | N | 0.495 | 0.559 | 0.682517699708 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | rs750748102 | None | 0.645 | D | 0.405 | 0.274 | 0.532503582573 | gnomAD-4.0.0 | 1.61667E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89088E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8403 | likely_pathogenic | 0.7689 | pathogenic | -2.304 | Highly Destabilizing | 0.742 | D | 0.435 | neutral | None | None | None | None | N |
I/C | 0.8772 | likely_pathogenic | 0.8266 | pathogenic | -1.355 | Destabilizing | 0.996 | D | 0.561 | neutral | None | None | None | None | N |
I/D | 0.9753 | likely_pathogenic | 0.9631 | pathogenic | -2.166 | Highly Destabilizing | 0.835 | D | 0.587 | neutral | None | None | None | None | N |
I/E | 0.8839 | likely_pathogenic | 0.8496 | pathogenic | -2.076 | Highly Destabilizing | 0.742 | D | 0.58 | neutral | None | None | None | None | N |
I/F | 0.3405 | ambiguous | 0.2714 | benign | -1.484 | Destabilizing | 0.984 | D | 0.52 | neutral | None | None | None | None | N |
I/G | 0.9418 | likely_pathogenic | 0.9126 | pathogenic | -2.733 | Highly Destabilizing | 0.742 | D | 0.576 | neutral | None | None | None | None | N |
I/H | 0.8656 | likely_pathogenic | 0.8045 | pathogenic | -2.018 | Highly Destabilizing | 0.987 | D | 0.675 | prob.neutral | None | None | None | None | N |
I/K | 0.6345 | likely_pathogenic | 0.5614 | ambiguous | -1.783 | Destabilizing | 0.521 | D | 0.572 | neutral | D | 0.522616217 | None | None | N |
I/L | 0.2421 | likely_benign | 0.1977 | benign | -1.129 | Destabilizing | 0.472 | N | 0.375 | neutral | N | 0.488365809 | None | None | N |
I/M | 0.1492 | likely_benign | 0.1274 | benign | -0.816 | Destabilizing | 0.979 | D | 0.515 | neutral | D | 0.53125139 | None | None | N |
I/N | 0.7435 | likely_pathogenic | 0.6675 | pathogenic | -1.701 | Destabilizing | 0.037 | N | 0.439 | neutral | None | None | None | None | N |
I/P | 0.9761 | likely_pathogenic | 0.9661 | pathogenic | -1.495 | Destabilizing | 0.984 | D | 0.667 | neutral | None | None | None | None | N |
I/Q | 0.7557 | likely_pathogenic | 0.6856 | pathogenic | -1.786 | Destabilizing | 0.91 | D | 0.651 | neutral | None | None | None | None | N |
I/R | 0.5894 | likely_pathogenic | 0.5033 | ambiguous | -1.211 | Destabilizing | 0.015 | N | 0.445 | neutral | D | 0.52698431 | None | None | N |
I/S | 0.8187 | likely_pathogenic | 0.7416 | pathogenic | -2.343 | Highly Destabilizing | 0.742 | D | 0.531 | neutral | None | None | None | None | N |
I/T | 0.7355 | likely_pathogenic | 0.6116 | pathogenic | -2.133 | Highly Destabilizing | 0.684 | D | 0.495 | neutral | N | 0.50613135 | None | None | N |
I/V | 0.1386 | likely_benign | 0.1194 | benign | -1.495 | Destabilizing | 0.645 | D | 0.405 | neutral | D | 0.527264148 | None | None | N |
I/W | 0.863 | likely_pathogenic | 0.8004 | pathogenic | -1.712 | Destabilizing | 0.996 | D | 0.688 | prob.neutral | None | None | None | None | N |
I/Y | 0.7227 | likely_pathogenic | 0.6608 | pathogenic | -1.499 | Destabilizing | 0.984 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.