Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26244 | 78955;78956;78957 | chr2:178567402;178567401;178567400 | chr2:179432129;179432128;179432127 |
N2AB | 24603 | 74032;74033;74034 | chr2:178567402;178567401;178567400 | chr2:179432129;179432128;179432127 |
N2A | 23676 | 71251;71252;71253 | chr2:178567402;178567401;178567400 | chr2:179432129;179432128;179432127 |
N2B | 17179 | 51760;51761;51762 | chr2:178567402;178567401;178567400 | chr2:179432129;179432128;179432127 |
Novex-1 | 17304 | 52135;52136;52137 | chr2:178567402;178567401;178567400 | chr2:179432129;179432128;179432127 |
Novex-2 | 17371 | 52336;52337;52338 | chr2:178567402;178567401;178567400 | chr2:179432129;179432128;179432127 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.014 | N | 0.299 | 0.264 | 0.253726318573 | gnomAD-4.0.0 | 6.89519E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03174E-07 | 0 | 0 |
N/H | None | None | 0.97 | N | 0.59 | 0.44 | 0.383921772103 | gnomAD-4.0.0 | 6.89519E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.19383E-05 | 0 |
N/S | None | None | 0.489 | N | 0.453 | 0.181 | 0.245660935333 | gnomAD-4.0.0 | 3.24203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89754E-06 | 0 | 3.07711E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4112 | ambiguous | 0.4393 | ambiguous | -0.635 | Destabilizing | 0.754 | D | 0.593 | neutral | None | None | None | None | N |
N/C | 0.3847 | ambiguous | 0.4064 | ambiguous | 0.242 | Stabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
N/D | 0.2459 | likely_benign | 0.2598 | benign | 0.084 | Stabilizing | 0.014 | N | 0.299 | neutral | N | 0.517282015 | None | None | N |
N/E | 0.5689 | likely_pathogenic | 0.6066 | pathogenic | 0.124 | Stabilizing | 0.754 | D | 0.443 | neutral | None | None | None | None | N |
N/F | 0.6909 | likely_pathogenic | 0.7066 | pathogenic | -0.66 | Destabilizing | 0.978 | D | 0.705 | prob.neutral | None | None | None | None | N |
N/G | 0.5013 | ambiguous | 0.5289 | ambiguous | -0.913 | Destabilizing | 0.86 | D | 0.439 | neutral | None | None | None | None | N |
N/H | 0.1781 | likely_benign | 0.1894 | benign | -0.769 | Destabilizing | 0.97 | D | 0.59 | neutral | N | 0.487138042 | None | None | N |
N/I | 0.2949 | likely_benign | 0.3028 | benign | 0.039 | Stabilizing | 0.942 | D | 0.707 | prob.neutral | N | 0.489264409 | None | None | N |
N/K | 0.4677 | ambiguous | 0.5008 | ambiguous | 0.027 | Stabilizing | 0.014 | N | 0.294 | neutral | N | 0.51068133 | None | None | N |
N/L | 0.3496 | ambiguous | 0.3574 | ambiguous | 0.039 | Stabilizing | 0.754 | D | 0.636 | neutral | None | None | None | None | N |
N/M | 0.3689 | ambiguous | 0.3784 | ambiguous | 0.42 | Stabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
N/P | 0.7946 | likely_pathogenic | 0.8057 | pathogenic | -0.156 | Destabilizing | 0.978 | D | 0.687 | prob.neutral | None | None | None | None | N |
N/Q | 0.48 | ambiguous | 0.5088 | ambiguous | -0.489 | Destabilizing | 0.956 | D | 0.567 | neutral | None | None | None | None | N |
N/R | 0.5321 | ambiguous | 0.5755 | pathogenic | 0.006 | Stabilizing | 0.754 | D | 0.524 | neutral | None | None | None | None | N |
N/S | 0.143 | likely_benign | 0.1539 | benign | -0.456 | Destabilizing | 0.489 | N | 0.453 | neutral | N | 0.45598284 | None | None | N |
N/T | 0.1545 | likely_benign | 0.1651 | benign | -0.23 | Destabilizing | 0.058 | N | 0.294 | neutral | N | 0.470605576 | None | None | N |
N/V | 0.309 | likely_benign | 0.3167 | benign | -0.156 | Destabilizing | 0.915 | D | 0.645 | neutral | None | None | None | None | N |
N/W | 0.8458 | likely_pathogenic | 0.849 | pathogenic | -0.492 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
N/Y | 0.1886 | likely_benign | 0.1997 | benign | -0.267 | Destabilizing | 0.99 | D | 0.692 | prob.neutral | N | 0.518743453 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.