Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26246 | 78961;78962;78963 | chr2:178567396;178567395;178567394 | chr2:179432123;179432122;179432121 |
N2AB | 24605 | 74038;74039;74040 | chr2:178567396;178567395;178567394 | chr2:179432123;179432122;179432121 |
N2A | 23678 | 71257;71258;71259 | chr2:178567396;178567395;178567394 | chr2:179432123;179432122;179432121 |
N2B | 17181 | 51766;51767;51768 | chr2:178567396;178567395;178567394 | chr2:179432123;179432122;179432121 |
Novex-1 | 17306 | 52141;52142;52143 | chr2:178567396;178567395;178567394 | chr2:179432123;179432122;179432121 |
Novex-2 | 17373 | 52342;52343;52344 | chr2:178567396;178567395;178567394 | chr2:179432123;179432122;179432121 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs866667558 | None | 0.978 | N | 0.59 | 0.345 | 0.231231049324 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2051 | likely_benign | 0.2246 | benign | -0.091 | Destabilizing | 0.957 | D | 0.607 | neutral | N | 0.468720714 | None | None | N |
D/C | 0.7767 | likely_pathogenic | 0.777 | pathogenic | -0.176 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/E | 0.2432 | likely_benign | 0.2615 | benign | -0.247 | Destabilizing | 0.039 | N | 0.245 | neutral | N | 0.451804547 | None | None | N |
D/F | 0.8037 | likely_pathogenic | 0.7954 | pathogenic | 0.17 | Stabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
D/G | 0.2811 | likely_benign | 0.3025 | benign | -0.298 | Destabilizing | 0.928 | D | 0.609 | neutral | N | 0.500687183 | None | None | N |
D/H | 0.4673 | ambiguous | 0.4883 | ambiguous | 0.615 | Stabilizing | 0.997 | D | 0.645 | neutral | N | 0.460593639 | None | None | N |
D/I | 0.4776 | ambiguous | 0.4527 | ambiguous | 0.409 | Stabilizing | 0.992 | D | 0.708 | prob.delet. | None | None | None | None | N |
D/K | 0.5651 | likely_pathogenic | 0.5651 | pathogenic | 0.414 | Stabilizing | 0.968 | D | 0.623 | neutral | None | None | None | None | N |
D/L | 0.4966 | ambiguous | 0.5007 | ambiguous | 0.409 | Stabilizing | 0.983 | D | 0.669 | neutral | None | None | None | None | N |
D/M | 0.7391 | likely_pathogenic | 0.7311 | pathogenic | 0.246 | Stabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
D/N | 0.1325 | likely_benign | 0.135 | benign | -0.114 | Destabilizing | 0.978 | D | 0.59 | neutral | N | 0.455438625 | None | None | N |
D/P | 0.5288 | ambiguous | 0.5589 | ambiguous | 0.265 | Stabilizing | 0.992 | D | 0.645 | neutral | None | None | None | None | N |
D/Q | 0.5084 | ambiguous | 0.5351 | ambiguous | -0.03 | Destabilizing | 0.968 | D | 0.64 | neutral | None | None | None | None | N |
D/R | 0.5788 | likely_pathogenic | 0.591 | pathogenic | 0.728 | Stabilizing | 0.983 | D | 0.67 | neutral | None | None | None | None | N |
D/S | 0.1837 | likely_benign | 0.1975 | benign | -0.187 | Destabilizing | 0.895 | D | 0.535 | neutral | None | None | None | None | N |
D/T | 0.341 | ambiguous | 0.3432 | ambiguous | -0.005 | Destabilizing | 0.983 | D | 0.659 | neutral | None | None | None | None | N |
D/V | 0.3007 | likely_benign | 0.2909 | benign | 0.265 | Stabilizing | 0.978 | D | 0.671 | neutral | N | 0.483977813 | None | None | N |
D/W | 0.9512 | likely_pathogenic | 0.9491 | pathogenic | 0.325 | Stabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
D/Y | 0.3652 | ambiguous | 0.3611 | ambiguous | 0.428 | Stabilizing | 0.999 | D | 0.684 | prob.neutral | N | 0.490561179 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.