Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26249 | 78970;78971;78972 | chr2:178567387;178567386;178567385 | chr2:179432114;179432113;179432112 |
N2AB | 24608 | 74047;74048;74049 | chr2:178567387;178567386;178567385 | chr2:179432114;179432113;179432112 |
N2A | 23681 | 71266;71267;71268 | chr2:178567387;178567386;178567385 | chr2:179432114;179432113;179432112 |
N2B | 17184 | 51775;51776;51777 | chr2:178567387;178567386;178567385 | chr2:179432114;179432113;179432112 |
Novex-1 | 17309 | 52150;52151;52152 | chr2:178567387;178567386;178567385 | chr2:179432114;179432113;179432112 |
Novex-2 | 17376 | 52351;52352;52353 | chr2:178567387;178567386;178567385 | chr2:179432114;179432113;179432112 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.743 | 0.3 | None | gnomAD-4.0.0 | 1.63133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.91187E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6235 | likely_pathogenic | 0.5925 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
A/D | 0.9713 | likely_pathogenic | 0.9682 | pathogenic | -2.624 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | N | 0.515238135 | None | None | N |
A/E | 0.9649 | likely_pathogenic | 0.9647 | pathogenic | -2.417 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
A/F | 0.8883 | likely_pathogenic | 0.8866 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
A/G | 0.3058 | likely_benign | 0.2701 | benign | -1.552 | Destabilizing | 1.0 | D | 0.575 | neutral | N | 0.457979343 | None | None | N |
A/H | 0.9573 | likely_pathogenic | 0.958 | pathogenic | -2.118 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
A/I | 0.7847 | likely_pathogenic | 0.7721 | pathogenic | 0.268 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
A/K | 0.9867 | likely_pathogenic | 0.9872 | pathogenic | -1.224 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
A/L | 0.6488 | likely_pathogenic | 0.6559 | pathogenic | 0.268 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
A/M | 0.6448 | likely_pathogenic | 0.6406 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/N | 0.8852 | likely_pathogenic | 0.8821 | pathogenic | -1.582 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
A/P | 0.9816 | likely_pathogenic | 0.9766 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.463454022 | None | None | N |
A/Q | 0.9444 | likely_pathogenic | 0.9467 | pathogenic | -1.35 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
A/R | 0.9774 | likely_pathogenic | 0.9788 | pathogenic | -1.368 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
A/S | 0.1823 | likely_benign | 0.1729 | benign | -1.945 | Destabilizing | 1.0 | D | 0.574 | neutral | N | 0.414591138 | None | None | N |
A/T | 0.164 | likely_benign | 0.1527 | benign | -1.616 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.390138197 | None | None | N |
A/V | 0.4272 | ambiguous | 0.4001 | ambiguous | -0.133 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.502730197 | None | None | N |
A/W | 0.9887 | likely_pathogenic | 0.9874 | pathogenic | -1.504 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/Y | 0.9288 | likely_pathogenic | 0.9302 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.