Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2625 | 8098;8099;8100 | chr2:178771454;178771453;178771452 | chr2:179636181;179636180;179636179 |
N2AB | 2625 | 8098;8099;8100 | chr2:178771454;178771453;178771452 | chr2:179636181;179636180;179636179 |
N2A | 2625 | 8098;8099;8100 | chr2:178771454;178771453;178771452 | chr2:179636181;179636180;179636179 |
N2B | 2579 | 7960;7961;7962 | chr2:178771454;178771453;178771452 | chr2:179636181;179636180;179636179 |
Novex-1 | 2579 | 7960;7961;7962 | chr2:178771454;178771453;178771452 | chr2:179636181;179636180;179636179 |
Novex-2 | 2579 | 7960;7961;7962 | chr2:178771454;178771453;178771452 | chr2:179636181;179636180;179636179 |
Novex-3 | 2625 | 8098;8099;8100 | chr2:178771454;178771453;178771452 | chr2:179636181;179636180;179636179 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | D | 0.824 | 0.46 | 0.444807159249 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1511 | likely_benign | 0.153 | benign | -0.975 | Destabilizing | 1.0 | D | 0.76 | deleterious | D | 0.571733012 | None | None | N |
P/C | 0.8031 | likely_pathogenic | 0.8032 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/D | 0.7432 | likely_pathogenic | 0.7285 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
P/E | 0.5329 | ambiguous | 0.5267 | ambiguous | -0.649 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/F | 0.7367 | likely_pathogenic | 0.7454 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
P/G | 0.576 | likely_pathogenic | 0.568 | pathogenic | -1.193 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/H | 0.3933 | ambiguous | 0.3828 | ambiguous | -0.733 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
P/I | 0.5051 | ambiguous | 0.5339 | ambiguous | -0.519 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
P/K | 0.4624 | ambiguous | 0.4602 | ambiguous | -0.78 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/L | 0.2388 | likely_benign | 0.2445 | benign | -0.519 | Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.592926914 | None | None | N |
P/M | 0.5095 | ambiguous | 0.5245 | ambiguous | -0.41 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/N | 0.6157 | likely_pathogenic | 0.6058 | pathogenic | -0.489 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
P/Q | 0.2998 | likely_benign | 0.3045 | benign | -0.723 | Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.571579235 | None | None | N |
P/R | 0.3224 | likely_benign | 0.3228 | benign | -0.244 | Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.568238386 | None | None | N |
P/S | 0.2929 | likely_benign | 0.2933 | benign | -0.936 | Destabilizing | 1.0 | D | 0.824 | deleterious | D | 0.584926552 | None | None | N |
P/T | 0.2235 | likely_benign | 0.2293 | benign | -0.907 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.562362129 | None | None | N |
P/V | 0.3633 | ambiguous | 0.3831 | ambiguous | -0.634 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
P/W | 0.8846 | likely_pathogenic | 0.8908 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
P/Y | 0.6627 | likely_pathogenic | 0.6665 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.