Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26268 | 79027;79028;79029 | chr2:178567330;178567329;178567328 | chr2:179432057;179432056;179432055 |
N2AB | 24627 | 74104;74105;74106 | chr2:178567330;178567329;178567328 | chr2:179432057;179432056;179432055 |
N2A | 23700 | 71323;71324;71325 | chr2:178567330;178567329;178567328 | chr2:179432057;179432056;179432055 |
N2B | 17203 | 51832;51833;51834 | chr2:178567330;178567329;178567328 | chr2:179432057;179432056;179432055 |
Novex-1 | 17328 | 52207;52208;52209 | chr2:178567330;178567329;178567328 | chr2:179432057;179432056;179432055 |
Novex-2 | 17395 | 52408;52409;52410 | chr2:178567330;178567329;178567328 | chr2:179432057;179432056;179432055 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1023398113 | None | 0.92 | D | 0.72 | 0.63 | 0.53600533864 | gnomAD-4.0.0 | 2.75416E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60819E-06 | 0 | 0 |
A/V | None | None | 0.061 | N | 0.281 | 0.384 | 0.440498838766 | gnomAD-4.0.0 | 1.6141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88339E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6478 | likely_pathogenic | 0.6329 | pathogenic | -1.63 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/D | 0.9979 | likely_pathogenic | 0.9973 | pathogenic | -1.978 | Destabilizing | 0.996 | D | 0.812 | deleterious | D | 0.628321048 | None | None | N |
A/E | 0.9928 | likely_pathogenic | 0.9911 | pathogenic | -1.939 | Destabilizing | 0.997 | D | 0.79 | deleterious | None | None | None | None | N |
A/F | 0.9375 | likely_pathogenic | 0.9274 | pathogenic | -1.204 | Destabilizing | 0.982 | D | 0.808 | deleterious | None | None | None | None | N |
A/G | 0.4788 | ambiguous | 0.4428 | ambiguous | -1.537 | Destabilizing | 0.986 | D | 0.725 | prob.delet. | D | 0.559661032 | None | None | N |
A/H | 0.9967 | likely_pathogenic | 0.996 | pathogenic | -1.63 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
A/I | 0.4905 | ambiguous | 0.451 | ambiguous | -0.444 | Destabilizing | 0.759 | D | 0.713 | prob.delet. | None | None | None | None | N |
A/K | 0.9981 | likely_pathogenic | 0.9977 | pathogenic | -1.418 | Destabilizing | 0.997 | D | 0.79 | deleterious | None | None | None | None | N |
A/L | 0.3398 | likely_benign | 0.3177 | benign | -0.444 | Destabilizing | 0.02 | N | 0.433 | neutral | None | None | None | None | N |
A/M | 0.6834 | likely_pathogenic | 0.6451 | pathogenic | -0.596 | Destabilizing | 0.982 | D | 0.769 | deleterious | None | None | None | None | N |
A/N | 0.9914 | likely_pathogenic | 0.9893 | pathogenic | -1.401 | Destabilizing | 0.997 | D | 0.812 | deleterious | None | None | None | None | N |
A/P | 0.9937 | likely_pathogenic | 0.9911 | pathogenic | -0.659 | Destabilizing | 0.996 | D | 0.791 | deleterious | D | 0.602581132 | None | None | N |
A/Q | 0.9876 | likely_pathogenic | 0.9855 | pathogenic | -1.505 | Destabilizing | 0.997 | D | 0.777 | deleterious | None | None | None | None | N |
A/R | 0.9944 | likely_pathogenic | 0.9936 | pathogenic | -1.144 | Destabilizing | 0.997 | D | 0.791 | deleterious | None | None | None | None | N |
A/S | 0.5541 | ambiguous | 0.5165 | ambiguous | -1.821 | Destabilizing | 0.959 | D | 0.707 | prob.neutral | D | 0.579425387 | None | None | N |
A/T | 0.512 | ambiguous | 0.4477 | ambiguous | -1.673 | Destabilizing | 0.92 | D | 0.72 | prob.delet. | D | 0.576669772 | None | None | N |
A/V | 0.2233 | likely_benign | 0.1921 | benign | -0.659 | Destabilizing | 0.061 | N | 0.281 | neutral | N | 0.505283871 | None | None | N |
A/W | 0.9982 | likely_pathogenic | 0.9976 | pathogenic | -1.597 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
A/Y | 0.9888 | likely_pathogenic | 0.9868 | pathogenic | -1.171 | Destabilizing | 0.997 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.