Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26278 | 79057;79058;79059 | chr2:178567300;178567299;178567298 | chr2:179432027;179432026;179432025 |
N2AB | 24637 | 74134;74135;74136 | chr2:178567300;178567299;178567298 | chr2:179432027;179432026;179432025 |
N2A | 23710 | 71353;71354;71355 | chr2:178567300;178567299;178567298 | chr2:179432027;179432026;179432025 |
N2B | 17213 | 51862;51863;51864 | chr2:178567300;178567299;178567298 | chr2:179432027;179432026;179432025 |
Novex-1 | 17338 | 52237;52238;52239 | chr2:178567300;178567299;178567298 | chr2:179432027;179432026;179432025 |
Novex-2 | 17405 | 52438;52439;52440 | chr2:178567300;178567299;178567298 | chr2:179432027;179432026;179432025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1235411503 | -0.853 | 0.885 | N | 0.613 | 0.257 | 0.335164054921 | gnomAD-4.0.0 | 1.60839E-06 | None | None | None | None | N | None | 0 | 2.35106E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | None | None | 0.964 | N | 0.783 | 0.489 | 0.657223871714 | gnomAD-4.0.0 | 2.7495E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60551E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0765 | likely_benign | 0.0708 | benign | -1.137 | Destabilizing | 0.885 | D | 0.613 | neutral | N | 0.455057333 | None | None | N |
P/C | 0.4509 | ambiguous | 0.3789 | ambiguous | -0.808 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
P/D | 0.5448 | ambiguous | 0.4832 | ambiguous | -0.808 | Destabilizing | 0.986 | D | 0.721 | prob.delet. | None | None | None | None | N |
P/E | 0.3471 | ambiguous | 0.3142 | benign | -0.836 | Destabilizing | 0.986 | D | 0.721 | prob.delet. | None | None | None | None | N |
P/F | 0.4451 | ambiguous | 0.3643 | ambiguous | -0.896 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
P/G | 0.352 | ambiguous | 0.2947 | benign | -1.413 | Destabilizing | 0.953 | D | 0.735 | prob.delet. | None | None | None | None | N |
P/H | 0.208 | likely_benign | 0.1764 | benign | -0.895 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
P/I | 0.2338 | likely_benign | 0.1987 | benign | -0.504 | Destabilizing | 0.986 | D | 0.817 | deleterious | None | None | None | None | N |
P/K | 0.3659 | ambiguous | 0.3292 | benign | -0.985 | Destabilizing | 0.986 | D | 0.718 | prob.delet. | None | None | None | None | N |
P/L | 0.1112 | likely_benign | 0.0975 | benign | -0.504 | Destabilizing | 0.964 | D | 0.783 | deleterious | N | 0.487516469 | None | None | N |
P/M | 0.2619 | likely_benign | 0.2245 | benign | -0.446 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
P/N | 0.334 | likely_benign | 0.2754 | benign | -0.741 | Destabilizing | 0.986 | D | 0.805 | deleterious | None | None | None | None | N |
P/Q | 0.1925 | likely_benign | 0.1719 | benign | -0.918 | Destabilizing | 0.991 | D | 0.766 | deleterious | N | 0.452075743 | None | None | N |
P/R | 0.2463 | likely_benign | 0.2185 | benign | -0.456 | Destabilizing | 0.991 | D | 0.818 | deleterious | N | 0.4813585 | None | None | N |
P/S | 0.1238 | likely_benign | 0.1066 | benign | -1.231 | Destabilizing | 0.58 | D | 0.427 | neutral | N | 0.402761644 | None | None | N |
P/T | 0.093 | likely_benign | 0.0836 | benign | -1.147 | Destabilizing | 0.322 | N | 0.437 | neutral | N | 0.395739671 | None | None | N |
P/V | 0.167 | likely_benign | 0.1449 | benign | -0.679 | Destabilizing | 0.973 | D | 0.759 | deleterious | None | None | None | None | N |
P/W | 0.6764 | likely_pathogenic | 0.5933 | pathogenic | -1.043 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/Y | 0.44 | ambiguous | 0.3692 | ambiguous | -0.756 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.