Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26293 | 79102;79103;79104 | chr2:178567255;178567254;178567253 | chr2:179431982;179431981;179431980 |
N2AB | 24652 | 74179;74180;74181 | chr2:178567255;178567254;178567253 | chr2:179431982;179431981;179431980 |
N2A | 23725 | 71398;71399;71400 | chr2:178567255;178567254;178567253 | chr2:179431982;179431981;179431980 |
N2B | 17228 | 51907;51908;51909 | chr2:178567255;178567254;178567253 | chr2:179431982;179431981;179431980 |
Novex-1 | 17353 | 52282;52283;52284 | chr2:178567255;178567254;178567253 | chr2:179431982;179431981;179431980 |
Novex-2 | 17420 | 52483;52484;52485 | chr2:178567255;178567254;178567253 | chr2:179431982;179431981;179431980 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.994 | N | 0.754 | 0.272 | 0.394536629495 | gnomAD-4.0.0 | 1.60906E-06 | None | None | None | None | N | None | 0 | 2.32829E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.164 | likely_benign | 0.2079 | benign | -0.417 | Destabilizing | 0.958 | D | 0.595 | neutral | N | 0.486777241 | None | None | N |
P/C | 0.6479 | likely_pathogenic | 0.6975 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
P/D | 0.5679 | likely_pathogenic | 0.6193 | pathogenic | -0.242 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
P/E | 0.4158 | ambiguous | 0.4821 | ambiguous | -0.348 | Destabilizing | 0.995 | D | 0.793 | deleterious | None | None | None | None | N |
P/F | 0.6617 | likely_pathogenic | 0.7214 | pathogenic | -0.619 | Destabilizing | 0.998 | D | 0.905 | deleterious | None | None | None | None | N |
P/G | 0.532 | ambiguous | 0.5794 | pathogenic | -0.527 | Destabilizing | 0.995 | D | 0.801 | deleterious | None | None | None | None | N |
P/H | 0.3848 | ambiguous | 0.4459 | ambiguous | -0.052 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
P/I | 0.4537 | ambiguous | 0.5326 | ambiguous | -0.274 | Destabilizing | 0.982 | D | 0.827 | deleterious | None | None | None | None | N |
P/K | 0.4485 | ambiguous | 0.5332 | ambiguous | -0.46 | Destabilizing | 0.995 | D | 0.789 | deleterious | None | None | None | None | N |
P/L | 0.2123 | likely_benign | 0.2656 | benign | -0.274 | Destabilizing | 0.142 | N | 0.57 | neutral | N | 0.521105512 | None | None | N |
P/M | 0.4279 | ambiguous | 0.4845 | ambiguous | -0.516 | Destabilizing | 0.998 | D | 0.882 | deleterious | None | None | None | None | N |
P/N | 0.4874 | ambiguous | 0.5429 | ambiguous | -0.276 | Destabilizing | 0.998 | D | 0.891 | deleterious | None | None | None | None | N |
P/Q | 0.3129 | likely_benign | 0.3812 | ambiguous | -0.483 | Destabilizing | 0.998 | D | 0.847 | deleterious | N | 0.487132863 | None | None | N |
P/R | 0.3543 | ambiguous | 0.4265 | ambiguous | 0.019 | Stabilizing | 0.994 | D | 0.889 | deleterious | N | 0.516339934 | None | None | N |
P/S | 0.2827 | likely_benign | 0.3414 | ambiguous | -0.623 | Destabilizing | 0.994 | D | 0.754 | deleterious | N | 0.467863292 | None | None | N |
P/T | 0.204 | likely_benign | 0.2485 | benign | -0.629 | Destabilizing | 0.988 | D | 0.724 | prob.delet. | N | 0.496665516 | None | None | N |
P/V | 0.3261 | likely_benign | 0.3873 | ambiguous | -0.289 | Destabilizing | 0.982 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/W | 0.8457 | likely_pathogenic | 0.8731 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/Y | 0.6773 | likely_pathogenic | 0.7359 | pathogenic | -0.408 | Destabilizing | 0.999 | D | 0.894 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.