Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26294 | 79105;79106;79107 | chr2:178567252;178567251;178567250 | chr2:179431979;179431978;179431977 |
N2AB | 24653 | 74182;74183;74184 | chr2:178567252;178567251;178567250 | chr2:179431979;179431978;179431977 |
N2A | 23726 | 71401;71402;71403 | chr2:178567252;178567251;178567250 | chr2:179431979;179431978;179431977 |
N2B | 17229 | 51910;51911;51912 | chr2:178567252;178567251;178567250 | chr2:179431979;179431978;179431977 |
Novex-1 | 17354 | 52285;52286;52287 | chr2:178567252;178567251;178567250 | chr2:179431979;179431978;179431977 |
Novex-2 | 17421 | 52486;52487;52488 | chr2:178567252;178567251;178567250 | chr2:179431979;179431978;179431977 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.003 | N | 0.255 | 0.061 | 0.185906805712 | gnomAD-4.0.0 | 1.61007E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46165E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6572 | likely_pathogenic | 0.5619 | ambiguous | -1.646 | Destabilizing | 0.296 | N | 0.752 | deleterious | N | 0.488973423 | None | None | N |
V/C | 0.8756 | likely_pathogenic | 0.8538 | pathogenic | -1.392 | Destabilizing | 0.991 | D | 0.714 | prob.delet. | None | None | None | None | N |
V/D | 0.9941 | likely_pathogenic | 0.9919 | pathogenic | -1.561 | Destabilizing | 0.879 | D | 0.83 | deleterious | N | 0.509799929 | None | None | N |
V/E | 0.9845 | likely_pathogenic | 0.9791 | pathogenic | -1.417 | Destabilizing | 0.906 | D | 0.785 | deleterious | None | None | None | None | N |
V/F | 0.5477 | ambiguous | 0.4899 | ambiguous | -0.959 | Destabilizing | 0.782 | D | 0.745 | deleterious | N | 0.482034436 | None | None | N |
V/G | 0.8693 | likely_pathogenic | 0.8204 | pathogenic | -2.115 | Highly Destabilizing | 0.879 | D | 0.793 | deleterious | N | 0.510560398 | None | None | N |
V/H | 0.9926 | likely_pathogenic | 0.9902 | pathogenic | -1.822 | Destabilizing | 0.991 | D | 0.813 | deleterious | None | None | None | None | N |
V/I | 0.0736 | likely_benign | 0.0745 | benign | -0.392 | Destabilizing | 0.003 | N | 0.255 | neutral | N | 0.444063975 | None | None | N |
V/K | 0.9898 | likely_pathogenic | 0.9869 | pathogenic | -1.313 | Destabilizing | 0.906 | D | 0.78 | deleterious | None | None | None | None | N |
V/L | 0.2073 | likely_benign | 0.1826 | benign | -0.392 | Destabilizing | 0.001 | N | 0.277 | neutral | N | 0.405862585 | None | None | N |
V/M | 0.3573 | ambiguous | 0.3181 | benign | -0.561 | Destabilizing | 0.826 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/N | 0.9757 | likely_pathogenic | 0.9681 | pathogenic | -1.392 | Destabilizing | 0.967 | D | 0.83 | deleterious | None | None | None | None | N |
V/P | 0.8423 | likely_pathogenic | 0.8014 | pathogenic | -0.777 | Destabilizing | 0.967 | D | 0.789 | deleterious | None | None | None | None | N |
V/Q | 0.9808 | likely_pathogenic | 0.9738 | pathogenic | -1.324 | Destabilizing | 0.967 | D | 0.789 | deleterious | None | None | None | None | N |
V/R | 0.9822 | likely_pathogenic | 0.9768 | pathogenic | -1.146 | Destabilizing | 0.906 | D | 0.829 | deleterious | None | None | None | None | N |
V/S | 0.9025 | likely_pathogenic | 0.8675 | pathogenic | -2.061 | Highly Destabilizing | 0.906 | D | 0.773 | deleterious | None | None | None | None | N |
V/T | 0.8219 | likely_pathogenic | 0.7714 | pathogenic | -1.775 | Destabilizing | 0.575 | D | 0.773 | deleterious | None | None | None | None | N |
V/W | 0.9866 | likely_pathogenic | 0.9817 | pathogenic | -1.321 | Destabilizing | 0.991 | D | 0.791 | deleterious | None | None | None | None | N |
V/Y | 0.957 | likely_pathogenic | 0.946 | pathogenic | -0.94 | Destabilizing | 0.906 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.