Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26296 | 79111;79112;79113 | chr2:178567246;178567245;178567244 | chr2:179431973;179431972;179431971 |
N2AB | 24655 | 74188;74189;74190 | chr2:178567246;178567245;178567244 | chr2:179431973;179431972;179431971 |
N2A | 23728 | 71407;71408;71409 | chr2:178567246;178567245;178567244 | chr2:179431973;179431972;179431971 |
N2B | 17231 | 51916;51917;51918 | chr2:178567246;178567245;178567244 | chr2:179431973;179431972;179431971 |
Novex-1 | 17356 | 52291;52292;52293 | chr2:178567246;178567245;178567244 | chr2:179431973;179431972;179431971 |
Novex-2 | 17423 | 52492;52493;52494 | chr2:178567246;178567245;178567244 | chr2:179431973;179431972;179431971 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs754938831 | -0.316 | 0.025 | N | 0.219 | 0.066 | 0.28492961333 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.08E-06 | 0 |
V/I | rs754938831 | -0.316 | 0.025 | N | 0.219 | 0.066 | 0.28492961333 | gnomAD-4.0.0 | 1.6098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88652E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6555 | likely_pathogenic | 0.6169 | pathogenic | -1.346 | Destabilizing | 0.892 | D | 0.523 | neutral | N | 0.513190412 | None | None | N |
V/C | 0.8628 | likely_pathogenic | 0.8618 | pathogenic | -1.221 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
V/D | 0.9759 | likely_pathogenic | 0.9684 | pathogenic | -0.566 | Destabilizing | 0.994 | D | 0.868 | deleterious | N | 0.515764638 | None | None | N |
V/E | 0.9432 | likely_pathogenic | 0.9263 | pathogenic | -0.552 | Destabilizing | 0.996 | D | 0.852 | deleterious | None | None | None | None | N |
V/F | 0.3608 | ambiguous | 0.3316 | benign | -1.019 | Destabilizing | 0.967 | D | 0.819 | deleterious | N | 0.470625224 | None | None | N |
V/G | 0.8213 | likely_pathogenic | 0.7946 | pathogenic | -1.674 | Destabilizing | 0.983 | D | 0.85 | deleterious | N | 0.507015226 | None | None | N |
V/H | 0.972 | likely_pathogenic | 0.967 | pathogenic | -1.135 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
V/I | 0.0674 | likely_benign | 0.068 | benign | -0.553 | Destabilizing | 0.025 | N | 0.219 | neutral | N | 0.457281201 | None | None | N |
V/K | 0.9647 | likely_pathogenic | 0.9557 | pathogenic | -1.019 | Destabilizing | 0.987 | D | 0.855 | deleterious | None | None | None | None | N |
V/L | 0.4101 | ambiguous | 0.4028 | ambiguous | -0.553 | Destabilizing | 0.369 | N | 0.404 | neutral | N | 0.475829464 | None | None | N |
V/M | 0.3319 | likely_benign | 0.3234 | benign | -0.585 | Destabilizing | 0.975 | D | 0.732 | prob.delet. | None | None | None | None | N |
V/N | 0.9219 | likely_pathogenic | 0.909 | pathogenic | -0.865 | Destabilizing | 0.996 | D | 0.875 | deleterious | None | None | None | None | N |
V/P | 0.8571 | likely_pathogenic | 0.8087 | pathogenic | -0.781 | Destabilizing | 0.996 | D | 0.863 | deleterious | None | None | None | None | N |
V/Q | 0.9415 | likely_pathogenic | 0.9288 | pathogenic | -0.959 | Destabilizing | 0.996 | D | 0.864 | deleterious | None | None | None | None | N |
V/R | 0.9528 | likely_pathogenic | 0.9432 | pathogenic | -0.614 | Destabilizing | 0.996 | D | 0.873 | deleterious | None | None | None | None | N |
V/S | 0.8478 | likely_pathogenic | 0.8289 | pathogenic | -1.522 | Destabilizing | 0.987 | D | 0.837 | deleterious | None | None | None | None | N |
V/T | 0.7421 | likely_pathogenic | 0.7226 | pathogenic | -1.371 | Destabilizing | 0.916 | D | 0.643 | neutral | None | None | None | None | N |
V/W | 0.957 | likely_pathogenic | 0.9508 | pathogenic | -1.14 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
V/Y | 0.8648 | likely_pathogenic | 0.8437 | pathogenic | -0.844 | Destabilizing | 0.987 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.