Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26300 | 79123;79124;79125 | chr2:178567234;178567233;178567232 | chr2:179431961;179431960;179431959 |
N2AB | 24659 | 74200;74201;74202 | chr2:178567234;178567233;178567232 | chr2:179431961;179431960;179431959 |
N2A | 23732 | 71419;71420;71421 | chr2:178567234;178567233;178567232 | chr2:179431961;179431960;179431959 |
N2B | 17235 | 51928;51929;51930 | chr2:178567234;178567233;178567232 | chr2:179431961;179431960;179431959 |
Novex-1 | 17360 | 52303;52304;52305 | chr2:178567234;178567233;178567232 | chr2:179431961;179431960;179431959 |
Novex-2 | 17427 | 52504;52505;52506 | chr2:178567234;178567233;178567232 | chr2:179431961;179431960;179431959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs750541239 | -0.622 | 0.988 | N | 0.702 | 0.469 | 0.419835214384 | gnomAD-2.1.1 | 2.05E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.52E-05 | 0 |
T/N | rs750541239 | -0.622 | 0.988 | N | 0.702 | 0.469 | 0.419835214384 | gnomAD-4.0.0 | 1.51092E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.98417E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3107 | likely_benign | 0.2819 | benign | -0.603 | Destabilizing | 0.825 | D | 0.465 | neutral | N | 0.490757395 | None | None | N |
T/C | 0.6899 | likely_pathogenic | 0.692 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/D | 0.7964 | likely_pathogenic | 0.7873 | pathogenic | -1.347 | Destabilizing | 0.991 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/E | 0.8996 | likely_pathogenic | 0.8865 | pathogenic | -1.331 | Destabilizing | 0.991 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/F | 0.6151 | likely_pathogenic | 0.5683 | pathogenic | -0.729 | Destabilizing | 0.995 | D | 0.793 | deleterious | None | None | None | None | N |
T/G | 0.388 | ambiguous | 0.3891 | ambiguous | -0.869 | Destabilizing | 0.938 | D | 0.613 | neutral | None | None | None | None | N |
T/H | 0.6154 | likely_pathogenic | 0.6071 | pathogenic | -1.27 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
T/I | 0.8126 | likely_pathogenic | 0.751 | pathogenic | 0.019 | Stabilizing | 0.994 | D | 0.776 | deleterious | N | 0.517699968 | None | None | N |
T/K | 0.7979 | likely_pathogenic | 0.796 | pathogenic | -0.855 | Destabilizing | 0.991 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/L | 0.3434 | ambiguous | 0.2818 | benign | 0.019 | Stabilizing | 0.968 | D | 0.609 | neutral | None | None | None | None | N |
T/M | 0.2357 | likely_benign | 0.2085 | benign | 0.417 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
T/N | 0.2822 | likely_benign | 0.2622 | benign | -1.042 | Destabilizing | 0.988 | D | 0.702 | prob.neutral | N | 0.476372442 | None | None | N |
T/P | 0.8443 | likely_pathogenic | 0.8259 | pathogenic | -0.156 | Destabilizing | 0.994 | D | 0.771 | deleterious | D | 0.522308324 | None | None | N |
T/Q | 0.6946 | likely_pathogenic | 0.6767 | pathogenic | -1.257 | Destabilizing | 0.991 | D | 0.757 | deleterious | None | None | None | None | N |
T/R | 0.7303 | likely_pathogenic | 0.7267 | pathogenic | -0.57 | Destabilizing | 0.991 | D | 0.762 | deleterious | None | None | None | None | N |
T/S | 0.1508 | likely_benign | 0.1494 | benign | -1.108 | Destabilizing | 0.234 | N | 0.35 | neutral | N | 0.454374182 | None | None | N |
T/V | 0.6198 | likely_pathogenic | 0.561 | ambiguous | -0.156 | Destabilizing | 0.968 | D | 0.553 | neutral | None | None | None | None | N |
T/W | 0.9066 | likely_pathogenic | 0.8828 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
T/Y | 0.6712 | likely_pathogenic | 0.6483 | pathogenic | -0.474 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.