Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26301 | 79126;79127;79128 | chr2:178567231;178567230;178567229 | chr2:179431958;179431957;179431956 |
N2AB | 24660 | 74203;74204;74205 | chr2:178567231;178567230;178567229 | chr2:179431958;179431957;179431956 |
N2A | 23733 | 71422;71423;71424 | chr2:178567231;178567230;178567229 | chr2:179431958;179431957;179431956 |
N2B | 17236 | 51931;51932;51933 | chr2:178567231;178567230;178567229 | chr2:179431958;179431957;179431956 |
Novex-1 | 17361 | 52306;52307;52308 | chr2:178567231;178567230;178567229 | chr2:179431958;179431957;179431956 |
Novex-2 | 17428 | 52507;52508;52509 | chr2:178567231;178567230;178567229 | chr2:179431958;179431957;179431956 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | None | N | 0.079 | 0.124 | 0.0401082797425 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0454 | likely_benign | 0.0461 | benign | -0.272 | Destabilizing | None | N | 0.079 | neutral | N | 0.423475272 | None | None | N |
S/C | 0.0919 | likely_benign | 0.0902 | benign | -0.638 | Destabilizing | None | N | 0.215 | neutral | N | 0.496784556 | None | None | N |
S/D | 0.5697 | likely_pathogenic | 0.5924 | pathogenic | -1.747 | Destabilizing | 0.016 | N | 0.381 | neutral | None | None | None | None | N |
S/E | 0.5247 | ambiguous | 0.5623 | ambiguous | -1.741 | Destabilizing | None | N | 0.103 | neutral | None | None | None | None | N |
S/F | 0.2804 | likely_benign | 0.2812 | benign | -0.678 | Destabilizing | 0.295 | N | 0.623 | neutral | N | 0.503367921 | None | None | N |
S/G | 0.0856 | likely_benign | 0.0827 | benign | -0.481 | Destabilizing | 0.016 | N | 0.347 | neutral | None | None | None | None | N |
S/H | 0.4549 | ambiguous | 0.4509 | ambiguous | -1.07 | Destabilizing | 0.356 | N | 0.591 | neutral | None | None | None | None | N |
S/I | 0.242 | likely_benign | 0.2445 | benign | 0.171 | Stabilizing | 0.072 | N | 0.615 | neutral | None | None | None | None | N |
S/K | 0.6151 | likely_pathogenic | 0.6263 | pathogenic | -0.729 | Destabilizing | 0.031 | N | 0.373 | neutral | None | None | None | None | N |
S/L | 0.1225 | likely_benign | 0.1219 | benign | 0.171 | Stabilizing | 0.016 | N | 0.537 | neutral | None | None | None | None | N |
S/M | 0.1866 | likely_benign | 0.1904 | benign | 0.451 | Stabilizing | 0.356 | N | 0.581 | neutral | None | None | None | None | N |
S/N | 0.215 | likely_benign | 0.2025 | benign | -1.052 | Destabilizing | 0.001 | N | 0.12 | neutral | None | None | None | None | N |
S/P | 0.3304 | likely_benign | 0.3185 | benign | 0.055 | Stabilizing | 0.055 | N | 0.595 | neutral | N | 0.502378773 | None | None | N |
S/Q | 0.4343 | ambiguous | 0.4529 | ambiguous | -1.314 | Destabilizing | 0.072 | N | 0.424 | neutral | None | None | None | None | N |
S/R | 0.5429 | ambiguous | 0.5485 | ambiguous | -0.494 | Destabilizing | 0.072 | N | 0.565 | neutral | None | None | None | None | N |
S/T | 0.1138 | likely_benign | 0.1053 | benign | -0.784 | Destabilizing | 0.012 | N | 0.372 | neutral | D | 0.526525069 | None | None | N |
S/V | 0.1721 | likely_benign | 0.1753 | benign | 0.055 | Stabilizing | 0.016 | N | 0.521 | neutral | None | None | None | None | N |
S/W | 0.4397 | ambiguous | 0.4529 | ambiguous | -0.824 | Destabilizing | 0.864 | D | 0.611 | neutral | None | None | None | None | N |
S/Y | 0.2759 | likely_benign | 0.2796 | benign | -0.431 | Destabilizing | 0.295 | N | 0.621 | neutral | N | 0.514217248 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.