Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26302 | 79129;79130;79131 | chr2:178567228;178567227;178567226 | chr2:179431955;179431954;179431953 |
N2AB | 24661 | 74206;74207;74208 | chr2:178567228;178567227;178567226 | chr2:179431955;179431954;179431953 |
N2A | 23734 | 71425;71426;71427 | chr2:178567228;178567227;178567226 | chr2:179431955;179431954;179431953 |
N2B | 17237 | 51934;51935;51936 | chr2:178567228;178567227;178567226 | chr2:179431955;179431954;179431953 |
Novex-1 | 17362 | 52309;52310;52311 | chr2:178567228;178567227;178567226 | chr2:179431955;179431954;179431953 |
Novex-2 | 17429 | 52510;52511;52512 | chr2:178567228;178567227;178567226 | chr2:179431955;179431954;179431953 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs534003014 | -0.504 | 0.011 | N | 0.131 | 0.033 | 0.130388298395 | gnomAD-2.1.1 | 6.16E-05 | None | None | None | None | N | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.26687E-04 | 0 |
E/D | rs534003014 | -0.504 | 0.011 | N | 0.131 | 0.033 | 0.130388298395 | gnomAD-3.1.2 | 8.55E-05 | None | None | None | None | N | None | 7.24E-05 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.32376E-04 | 0 | 0 |
E/D | rs534003014 | -0.504 | 0.011 | N | 0.131 | 0.033 | 0.130388298395 | gnomAD-4.0.0 | 1.91421E-04 | None | None | None | None | N | None | 1.87271E-04 | 5.03761E-05 | None | 0 | 0 | None | 0 | 0 | 2.41268E-04 | 0 | 1.12504E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.537 | ambiguous | 0.5501 | ambiguous | -0.686 | Destabilizing | 0.892 | D | 0.569 | neutral | N | 0.515286568 | None | None | N |
E/C | 0.9638 | likely_pathogenic | 0.9639 | pathogenic | -0.068 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/D | 0.1482 | likely_benign | 0.1862 | benign | -0.806 | Destabilizing | 0.011 | N | 0.131 | neutral | N | 0.470012851 | None | None | N |
E/F | 0.9628 | likely_pathogenic | 0.9615 | pathogenic | -0.726 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/G | 0.4109 | ambiguous | 0.4342 | ambiguous | -0.941 | Destabilizing | 0.892 | D | 0.567 | neutral | N | 0.468797891 | None | None | N |
E/H | 0.8388 | likely_pathogenic | 0.8654 | pathogenic | -0.931 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
E/I | 0.8705 | likely_pathogenic | 0.8721 | pathogenic | -0.028 | Destabilizing | 0.987 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/K | 0.5865 | likely_pathogenic | 0.6082 | pathogenic | -0.05 | Destabilizing | 0.892 | D | 0.547 | neutral | N | 0.469367322 | None | None | N |
E/L | 0.8188 | likely_pathogenic | 0.8291 | pathogenic | -0.028 | Destabilizing | 0.987 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/M | 0.8563 | likely_pathogenic | 0.8605 | pathogenic | 0.427 | Stabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
E/N | 0.48 | ambiguous | 0.5547 | ambiguous | -0.334 | Destabilizing | 0.95 | D | 0.6 | neutral | None | None | None | None | N |
E/P | 0.9832 | likely_pathogenic | 0.9847 | pathogenic | -0.227 | Destabilizing | 0.987 | D | 0.627 | neutral | None | None | None | None | N |
E/Q | 0.3616 | ambiguous | 0.3902 | ambiguous | -0.312 | Destabilizing | 0.983 | D | 0.618 | neutral | N | 0.47407781 | None | None | N |
E/R | 0.7223 | likely_pathogenic | 0.7425 | pathogenic | 0.002 | Stabilizing | 0.987 | D | 0.625 | neutral | None | None | None | None | N |
E/S | 0.4552 | ambiguous | 0.5036 | ambiguous | -0.559 | Destabilizing | 0.916 | D | 0.543 | neutral | None | None | None | None | N |
E/T | 0.5548 | ambiguous | 0.6001 | pathogenic | -0.352 | Destabilizing | 0.975 | D | 0.585 | neutral | None | None | None | None | N |
E/V | 0.7126 | likely_pathogenic | 0.7088 | pathogenic | -0.227 | Destabilizing | 0.983 | D | 0.667 | neutral | N | 0.492435554 | None | None | N |
E/W | 0.9852 | likely_pathogenic | 0.9852 | pathogenic | -0.606 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/Y | 0.9237 | likely_pathogenic | 0.9268 | pathogenic | -0.485 | Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.