Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26306 | 79141;79142;79143 | chr2:178567216;178567215;178567214 | chr2:179431943;179431942;179431941 |
N2AB | 24665 | 74218;74219;74220 | chr2:178567216;178567215;178567214 | chr2:179431943;179431942;179431941 |
N2A | 23738 | 71437;71438;71439 | chr2:178567216;178567215;178567214 | chr2:179431943;179431942;179431941 |
N2B | 17241 | 51946;51947;51948 | chr2:178567216;178567215;178567214 | chr2:179431943;179431942;179431941 |
Novex-1 | 17366 | 52321;52322;52323 | chr2:178567216;178567215;178567214 | chr2:179431943;179431942;179431941 |
Novex-2 | 17433 | 52522;52523;52524 | chr2:178567216;178567215;178567214 | chr2:179431943;179431942;179431941 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs374124734 | None | 0.994 | D | 0.911 | 0.653 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/S | rs374124734 | None | 0.994 | D | 0.911 | 0.653 | None | gnomAD-4.0.0 | 6.57445E-06 | None | None | None | None | N | None | 2.41348E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9496 | likely_pathogenic | 0.9617 | pathogenic | -2.444 | Highly Destabilizing | 0.968 | D | 0.75 | deleterious | None | None | None | None | N |
L/C | 0.8855 | likely_pathogenic | 0.9166 | pathogenic | -2.01 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -2.811 | Highly Destabilizing | 0.998 | D | 0.928 | deleterious | None | None | None | None | N |
L/E | 0.9984 | likely_pathogenic | 0.9987 | pathogenic | -2.494 | Highly Destabilizing | 0.998 | D | 0.917 | deleterious | None | None | None | None | N |
L/F | 0.5637 | ambiguous | 0.6687 | pathogenic | -1.478 | Destabilizing | 0.988 | D | 0.736 | prob.delet. | N | 0.514797722 | None | None | N |
L/G | 0.9954 | likely_pathogenic | 0.9967 | pathogenic | -3.077 | Highly Destabilizing | 0.995 | D | 0.914 | deleterious | None | None | None | None | N |
L/H | 0.9955 | likely_pathogenic | 0.9968 | pathogenic | -2.827 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/I | 0.086 | likely_benign | 0.083 | benign | -0.568 | Destabilizing | 0.067 | N | 0.333 | neutral | N | 0.514505495 | None | None | N |
L/K | 0.9973 | likely_pathogenic | 0.9978 | pathogenic | -1.793 | Destabilizing | 0.995 | D | 0.909 | deleterious | None | None | None | None | N |
L/M | 0.2857 | likely_benign | 0.3282 | benign | -0.846 | Destabilizing | 0.991 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/N | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -2.399 | Highly Destabilizing | 0.998 | D | 0.937 | deleterious | None | None | None | None | N |
L/P | 0.998 | likely_pathogenic | 0.9979 | pathogenic | -1.179 | Destabilizing | 0.998 | D | 0.937 | deleterious | None | None | None | None | N |
L/Q | 0.9937 | likely_pathogenic | 0.9952 | pathogenic | -2.051 | Highly Destabilizing | 1.0 | D | 0.941 | deleterious | None | None | None | None | N |
L/R | 0.9942 | likely_pathogenic | 0.995 | pathogenic | -1.904 | Destabilizing | 0.998 | D | 0.932 | deleterious | None | None | None | None | N |
L/S | 0.9957 | likely_pathogenic | 0.997 | pathogenic | -3.105 | Highly Destabilizing | 0.994 | D | 0.911 | deleterious | D | 0.565275826 | None | None | N |
L/T | 0.9718 | likely_pathogenic | 0.9781 | pathogenic | -2.605 | Highly Destabilizing | 0.991 | D | 0.815 | deleterious | None | None | None | None | N |
L/V | 0.1045 | likely_benign | 0.1095 | benign | -1.179 | Destabilizing | 0.618 | D | 0.672 | neutral | D | 0.522506116 | None | None | N |
L/W | 0.9804 | likely_pathogenic | 0.9881 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/Y | 0.982 | likely_pathogenic | 0.9883 | pathogenic | -1.571 | Destabilizing | 0.995 | D | 0.842 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.