Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26307 | 79144;79145;79146 | chr2:178567213;178567212;178567211 | chr2:179431940;179431939;179431938 |
N2AB | 24666 | 74221;74222;74223 | chr2:178567213;178567212;178567211 | chr2:179431940;179431939;179431938 |
N2A | 23739 | 71440;71441;71442 | chr2:178567213;178567212;178567211 | chr2:179431940;179431939;179431938 |
N2B | 17242 | 51949;51950;51951 | chr2:178567213;178567212;178567211 | chr2:179431940;179431939;179431938 |
Novex-1 | 17367 | 52324;52325;52326 | chr2:178567213;178567212;178567211 | chr2:179431940;179431939;179431938 |
Novex-2 | 17434 | 52525;52526;52527 | chr2:178567213;178567212;178567211 | chr2:179431940;179431939;179431938 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.055 | N | 0.445 | 0.183 | 0.376745185316 | gnomAD-4.0.0 | 1.59938E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8732E-06 | 0 | 0 |
T/R | None | None | None | N | 0.275 | 0.212 | 0.481616744073 | gnomAD-4.0.0 | 1.59938E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77701E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0582 | likely_benign | 0.0623 | benign | -1.131 | Destabilizing | None | N | 0.132 | neutral | N | 0.438847369 | None | None | N |
T/C | 0.2314 | likely_benign | 0.2412 | benign | -0.779 | Destabilizing | 0.356 | N | 0.503 | neutral | None | None | None | None | N |
T/D | 0.3961 | ambiguous | 0.3988 | ambiguous | -0.724 | Destabilizing | 0.072 | N | 0.416 | neutral | None | None | None | None | N |
T/E | 0.3204 | likely_benign | 0.3156 | benign | -0.615 | Destabilizing | 0.031 | N | 0.368 | neutral | None | None | None | None | N |
T/F | 0.1348 | likely_benign | 0.1404 | benign | -0.976 | Destabilizing | 0.356 | N | 0.569 | neutral | None | None | None | None | N |
T/G | 0.1476 | likely_benign | 0.1667 | benign | -1.49 | Destabilizing | 0.016 | N | 0.434 | neutral | None | None | None | None | N |
T/H | 0.1748 | likely_benign | 0.1747 | benign | -1.694 | Destabilizing | 0.356 | N | 0.562 | neutral | None | None | None | None | N |
T/I | 0.1073 | likely_benign | 0.1097 | benign | -0.226 | Destabilizing | 0.055 | N | 0.445 | neutral | N | 0.514673279 | None | None | N |
T/K | 0.2195 | likely_benign | 0.2263 | benign | -0.68 | Destabilizing | 0.012 | N | 0.37 | neutral | N | 0.490217552 | None | None | N |
T/L | 0.0666 | likely_benign | 0.0709 | benign | -0.226 | Destabilizing | 0.016 | N | 0.351 | neutral | None | None | None | None | N |
T/M | 0.0738 | likely_benign | 0.0747 | benign | -0.075 | Destabilizing | 0.356 | N | 0.498 | neutral | None | None | None | None | N |
T/N | 0.0995 | likely_benign | 0.1028 | benign | -0.996 | Destabilizing | 0.038 | N | 0.3 | neutral | None | None | None | None | N |
T/P | 0.7157 | likely_pathogenic | 0.7707 | pathogenic | -0.495 | Destabilizing | 0.055 | N | 0.442 | neutral | N | 0.504769819 | None | None | N |
T/Q | 0.1797 | likely_benign | 0.1834 | benign | -0.967 | Destabilizing | 0.072 | N | 0.461 | neutral | None | None | None | None | N |
T/R | 0.1795 | likely_benign | 0.1836 | benign | -0.679 | Destabilizing | None | N | 0.275 | neutral | N | 0.48673453 | None | None | N |
T/S | 0.067 | likely_benign | 0.0683 | benign | -1.304 | Destabilizing | None | N | 0.159 | neutral | N | 0.370520648 | None | None | N |
T/V | 0.0891 | likely_benign | 0.093 | benign | -0.495 | Destabilizing | 0.016 | N | 0.272 | neutral | None | None | None | None | N |
T/W | 0.4363 | ambiguous | 0.4358 | ambiguous | -0.962 | Destabilizing | 0.864 | D | 0.598 | neutral | None | None | None | None | N |
T/Y | 0.1841 | likely_benign | 0.1916 | benign | -0.669 | Destabilizing | 0.356 | N | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.