Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26318 | 79177;79178;79179 | chr2:178567180;178567179;178567178 | chr2:179431907;179431906;179431905 |
N2AB | 24677 | 74254;74255;74256 | chr2:178567180;178567179;178567178 | chr2:179431907;179431906;179431905 |
N2A | 23750 | 71473;71474;71475 | chr2:178567180;178567179;178567178 | chr2:179431907;179431906;179431905 |
N2B | 17253 | 51982;51983;51984 | chr2:178567180;178567179;178567178 | chr2:179431907;179431906;179431905 |
Novex-1 | 17378 | 52357;52358;52359 | chr2:178567180;178567179;178567178 | chr2:179431907;179431906;179431905 |
Novex-2 | 17445 | 52558;52559;52560 | chr2:178567180;178567179;178567178 | chr2:179431907;179431906;179431905 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs772799438 | 0.665 | 0.004 | N | 0.266 | 0.108 | 0.158396225186 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.55E-05 | None | 0 | 0 | 0 |
D/N | rs772799438 | 0.665 | 0.004 | N | 0.266 | 0.108 | 0.158396225186 | gnomAD-4.0.0 | 2.05333E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.47971E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0982 | likely_benign | 0.1038 | benign | -0.054 | Destabilizing | 0.201 | N | 0.485 | neutral | N | 0.444175831 | None | None | I |
D/C | 0.48 | ambiguous | 0.511 | ambiguous | 0.328 | Stabilizing | 0.992 | D | 0.461 | neutral | None | None | None | None | I |
D/E | 0.1072 | likely_benign | 0.1146 | benign | -0.131 | Destabilizing | 0.004 | N | 0.134 | neutral | N | 0.405462727 | None | None | I |
D/F | 0.5092 | ambiguous | 0.5227 | ambiguous | -0.257 | Destabilizing | 0.972 | D | 0.471 | neutral | None | None | None | None | I |
D/G | 0.1421 | likely_benign | 0.1591 | benign | -0.182 | Destabilizing | 0.002 | N | 0.144 | neutral | N | 0.458779924 | None | None | I |
D/H | 0.2317 | likely_benign | 0.2369 | benign | -0.046 | Destabilizing | 0.81 | D | 0.437 | neutral | N | 0.484638374 | None | None | I |
D/I | 0.2315 | likely_benign | 0.2393 | benign | 0.214 | Stabilizing | 0.92 | D | 0.491 | neutral | None | None | None | None | I |
D/K | 0.2533 | likely_benign | 0.2544 | benign | 0.623 | Stabilizing | 0.447 | N | 0.441 | neutral | None | None | None | None | I |
D/L | 0.2615 | likely_benign | 0.2732 | benign | 0.214 | Stabilizing | 0.617 | D | 0.463 | neutral | None | None | None | None | I |
D/M | 0.4262 | ambiguous | 0.4402 | ambiguous | 0.354 | Stabilizing | 0.992 | D | 0.455 | neutral | None | None | None | None | I |
D/N | 0.0876 | likely_benign | 0.0907 | benign | 0.484 | Stabilizing | 0.004 | N | 0.266 | neutral | N | 0.492911141 | None | None | I |
D/P | 0.3393 | likely_benign | 0.3355 | benign | 0.145 | Stabilizing | 0.92 | D | 0.448 | neutral | None | None | None | None | I |
D/Q | 0.2289 | likely_benign | 0.238 | benign | 0.482 | Stabilizing | 0.739 | D | 0.366 | neutral | None | None | None | None | I |
D/R | 0.316 | likely_benign | 0.3252 | benign | 0.626 | Stabilizing | 0.85 | D | 0.451 | neutral | None | None | None | None | I |
D/S | 0.0931 | likely_benign | 0.0989 | benign | 0.391 | Stabilizing | 0.026 | N | 0.066 | neutral | None | None | None | None | I |
D/T | 0.152 | likely_benign | 0.1592 | benign | 0.49 | Stabilizing | 0.447 | N | 0.447 | neutral | None | None | None | None | I |
D/V | 0.1348 | likely_benign | 0.1392 | benign | 0.145 | Stabilizing | 0.896 | D | 0.463 | neutral | D | 0.523983409 | None | None | I |
D/W | 0.8775 | likely_pathogenic | 0.8728 | pathogenic | -0.233 | Destabilizing | 0.992 | D | 0.58 | neutral | None | None | None | None | I |
D/Y | 0.2368 | likely_benign | 0.2488 | benign | -0.038 | Destabilizing | 0.963 | D | 0.472 | neutral | N | 0.481777265 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.