Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26323 | 79192;79193;79194 | chr2:178567165;178567164;178567163 | chr2:179431892;179431891;179431890 |
N2AB | 24682 | 74269;74270;74271 | chr2:178567165;178567164;178567163 | chr2:179431892;179431891;179431890 |
N2A | 23755 | 71488;71489;71490 | chr2:178567165;178567164;178567163 | chr2:179431892;179431891;179431890 |
N2B | 17258 | 51997;51998;51999 | chr2:178567165;178567164;178567163 | chr2:179431892;179431891;179431890 |
Novex-1 | 17383 | 52372;52373;52374 | chr2:178567165;178567164;178567163 | chr2:179431892;179431891;179431890 |
Novex-2 | 17450 | 52573;52574;52575 | chr2:178567165;178567164;178567163 | chr2:179431892;179431891;179431890 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.642 | N | 0.713 | 0.367 | 0.767911445349 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
V/I | None | None | 0.001 | N | 0.308 | 0.033 | 0.36893422563 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4494 | ambiguous | 0.491 | ambiguous | -2.281 | Highly Destabilizing | 0.003 | N | 0.484 | neutral | N | 0.475532613 | None | None | N |
V/C | 0.7866 | likely_pathogenic | 0.7868 | pathogenic | -1.73 | Destabilizing | 0.973 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/D | 0.893 | likely_pathogenic | 0.889 | pathogenic | -3.175 | Highly Destabilizing | 0.879 | D | 0.767 | deleterious | N | 0.477089549 | None | None | N |
V/E | 0.7 | likely_pathogenic | 0.7362 | pathogenic | -3.003 | Highly Destabilizing | 0.826 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/F | 0.3497 | ambiguous | 0.3306 | benign | -1.351 | Destabilizing | 0.782 | D | 0.709 | prob.delet. | N | 0.512323621 | None | None | N |
V/G | 0.703 | likely_pathogenic | 0.7538 | pathogenic | -2.739 | Highly Destabilizing | 0.642 | D | 0.713 | prob.delet. | N | 0.496714742 | None | None | N |
V/H | 0.8091 | likely_pathogenic | 0.7907 | pathogenic | -2.479 | Highly Destabilizing | 0.991 | D | 0.748 | deleterious | None | None | None | None | N |
V/I | 0.0601 | likely_benign | 0.056 | benign | -1.004 | Destabilizing | 0.001 | N | 0.308 | neutral | N | 0.403329286 | None | None | N |
V/K | 0.6605 | likely_pathogenic | 0.6896 | pathogenic | -2.02 | Highly Destabilizing | 0.826 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/L | 0.2171 | likely_benign | 0.2015 | benign | -1.004 | Destabilizing | 0.068 | N | 0.532 | neutral | N | 0.502029269 | None | None | N |
V/M | 0.1726 | likely_benign | 0.1832 | benign | -0.97 | Destabilizing | 0.826 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/N | 0.6836 | likely_pathogenic | 0.6633 | pathogenic | -2.253 | Highly Destabilizing | 0.906 | D | 0.772 | deleterious | None | None | None | None | N |
V/P | 0.9915 | likely_pathogenic | 0.9888 | pathogenic | -1.407 | Destabilizing | 0.906 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/Q | 0.6182 | likely_pathogenic | 0.6632 | pathogenic | -2.164 | Highly Destabilizing | 0.906 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/R | 0.5697 | likely_pathogenic | 0.5857 | pathogenic | -1.673 | Destabilizing | 0.826 | D | 0.768 | deleterious | None | None | None | None | N |
V/S | 0.5267 | ambiguous | 0.5539 | ambiguous | -2.745 | Highly Destabilizing | 0.704 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/T | 0.2662 | likely_benign | 0.2903 | benign | -2.468 | Highly Destabilizing | 0.575 | D | 0.639 | neutral | None | None | None | None | N |
V/W | 0.9147 | likely_pathogenic | 0.8941 | pathogenic | -1.929 | Destabilizing | 0.991 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/Y | 0.7604 | likely_pathogenic | 0.7277 | pathogenic | -1.633 | Destabilizing | 0.906 | D | 0.72 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.