Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26332 | 79219;79220;79221 | chr2:178567138;178567137;178567136 | chr2:179431865;179431864;179431863 |
N2AB | 24691 | 74296;74297;74298 | chr2:178567138;178567137;178567136 | chr2:179431865;179431864;179431863 |
N2A | 23764 | 71515;71516;71517 | chr2:178567138;178567137;178567136 | chr2:179431865;179431864;179431863 |
N2B | 17267 | 52024;52025;52026 | chr2:178567138;178567137;178567136 | chr2:179431865;179431864;179431863 |
Novex-1 | 17392 | 52399;52400;52401 | chr2:178567138;178567137;178567136 | chr2:179431865;179431864;179431863 |
Novex-2 | 17459 | 52600;52601;52602 | chr2:178567138;178567137;178567136 | chr2:179431865;179431864;179431863 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.919 | N | 0.493 | 0.237 | 0.365703291355 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8686 | likely_pathogenic | 0.8906 | pathogenic | -0.441 | Destabilizing | 0.968 | D | 0.604 | neutral | None | None | None | None | I |
L/C | 0.9589 | likely_pathogenic | 0.9702 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
L/D | 0.9918 | likely_pathogenic | 0.9937 | pathogenic | -0.188 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | I |
L/E | 0.961 | likely_pathogenic | 0.9657 | pathogenic | -0.277 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | I |
L/F | 0.7826 | likely_pathogenic | 0.8016 | pathogenic | -0.594 | Destabilizing | 0.988 | D | 0.647 | neutral | N | 0.498614072 | None | None | I |
L/G | 0.9739 | likely_pathogenic | 0.9768 | pathogenic | -0.539 | Destabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | I |
L/H | 0.9315 | likely_pathogenic | 0.9441 | pathogenic | 0.116 | Stabilizing | 0.999 | D | 0.741 | deleterious | N | 0.473672962 | None | None | I |
L/I | 0.2401 | likely_benign | 0.2371 | benign | -0.303 | Destabilizing | 0.919 | D | 0.493 | neutral | N | 0.510976826 | None | None | I |
L/K | 0.8987 | likely_pathogenic | 0.9083 | pathogenic | -0.324 | Destabilizing | 0.991 | D | 0.675 | prob.neutral | None | None | None | None | I |
L/M | 0.3653 | ambiguous | 0.3939 | ambiguous | -0.612 | Destabilizing | 0.862 | D | 0.509 | neutral | None | None | None | None | I |
L/N | 0.9538 | likely_pathogenic | 0.9631 | pathogenic | -0.202 | Destabilizing | 0.995 | D | 0.733 | prob.delet. | None | None | None | None | I |
L/P | 0.9089 | likely_pathogenic | 0.9279 | pathogenic | -0.322 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | N | 0.519364236 | None | None | I |
L/Q | 0.8779 | likely_pathogenic | 0.8993 | pathogenic | -0.37 | Destabilizing | 0.995 | D | 0.703 | prob.neutral | None | None | None | None | I |
L/R | 0.8583 | likely_pathogenic | 0.8693 | pathogenic | 0.126 | Stabilizing | 0.994 | D | 0.697 | prob.neutral | N | 0.50326142 | None | None | I |
L/S | 0.9602 | likely_pathogenic | 0.97 | pathogenic | -0.589 | Destabilizing | 0.991 | D | 0.679 | prob.neutral | None | None | None | None | I |
L/T | 0.8714 | likely_pathogenic | 0.91 | pathogenic | -0.579 | Destabilizing | 0.991 | D | 0.639 | neutral | None | None | None | None | I |
L/V | 0.3739 | ambiguous | 0.4026 | ambiguous | -0.322 | Destabilizing | 0.919 | D | 0.536 | neutral | N | 0.484598302 | None | None | I |
L/W | 0.8801 | likely_pathogenic | 0.8948 | pathogenic | -0.613 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
L/Y | 0.9254 | likely_pathogenic | 0.9368 | pathogenic | -0.38 | Destabilizing | 0.995 | D | 0.675 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.