Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26337 | 79234;79235;79236 | chr2:178567123;178567122;178567121 | chr2:179431850;179431849;179431848 |
N2AB | 24696 | 74311;74312;74313 | chr2:178567123;178567122;178567121 | chr2:179431850;179431849;179431848 |
N2A | 23769 | 71530;71531;71532 | chr2:178567123;178567122;178567121 | chr2:179431850;179431849;179431848 |
N2B | 17272 | 52039;52040;52041 | chr2:178567123;178567122;178567121 | chr2:179431850;179431849;179431848 |
Novex-1 | 17397 | 52414;52415;52416 | chr2:178567123;178567122;178567121 | chr2:179431850;179431849;179431848 |
Novex-2 | 17464 | 52615;52616;52617 | chr2:178567123;178567122;178567121 | chr2:179431850;179431849;179431848 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.426 | N | 0.53 | 0.207 | 0.495839474393 | gnomAD-4.0.0 | 1.59177E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85933E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3041 | likely_benign | 0.3465 | ambiguous | -1.232 | Destabilizing | 0.426 | N | 0.548 | neutral | N | 0.476395214 | None | None | I |
V/C | 0.8635 | likely_pathogenic | 0.8703 | pathogenic | -1.028 | Destabilizing | 0.995 | D | 0.709 | prob.delet. | None | None | None | None | I |
V/D | 0.9849 | likely_pathogenic | 0.9901 | pathogenic | -1.011 | Destabilizing | 0.975 | D | 0.772 | deleterious | D | 0.522910073 | None | None | I |
V/E | 0.9584 | likely_pathogenic | 0.967 | pathogenic | -0.988 | Destabilizing | 0.944 | D | 0.686 | prob.neutral | None | None | None | None | I |
V/F | 0.5759 | likely_pathogenic | 0.664 | pathogenic | -0.874 | Destabilizing | 0.474 | N | 0.593 | neutral | N | 0.502270922 | None | None | I |
V/G | 0.782 | likely_pathogenic | 0.8241 | pathogenic | -1.549 | Destabilizing | 0.928 | D | 0.716 | prob.delet. | D | 0.523163562 | None | None | I |
V/H | 0.9802 | likely_pathogenic | 0.9855 | pathogenic | -0.94 | Destabilizing | 0.893 | D | 0.775 | deleterious | None | None | None | None | I |
V/I | 0.1214 | likely_benign | 0.1215 | benign | -0.464 | Destabilizing | 0.426 | N | 0.53 | neutral | N | 0.480154196 | None | None | I |
V/K | 0.9817 | likely_pathogenic | 0.9873 | pathogenic | -1.13 | Destabilizing | 0.944 | D | 0.694 | prob.neutral | None | None | None | None | I |
V/L | 0.5708 | likely_pathogenic | 0.6458 | pathogenic | -0.464 | Destabilizing | 0.271 | N | 0.455 | neutral | N | 0.521327106 | None | None | I |
V/M | 0.4365 | ambiguous | 0.4951 | ambiguous | -0.518 | Destabilizing | 0.981 | D | 0.609 | neutral | None | None | None | None | I |
V/N | 0.9456 | likely_pathogenic | 0.9588 | pathogenic | -1.093 | Destabilizing | 0.944 | D | 0.784 | deleterious | None | None | None | None | I |
V/P | 0.9782 | likely_pathogenic | 0.9805 | pathogenic | -0.685 | Destabilizing | 0.981 | D | 0.749 | deleterious | None | None | None | None | I |
V/Q | 0.9475 | likely_pathogenic | 0.9578 | pathogenic | -1.186 | Destabilizing | 0.944 | D | 0.753 | deleterious | None | None | None | None | I |
V/R | 0.9705 | likely_pathogenic | 0.9776 | pathogenic | -0.647 | Destabilizing | 0.944 | D | 0.783 | deleterious | None | None | None | None | I |
V/S | 0.6823 | likely_pathogenic | 0.7414 | pathogenic | -1.6 | Destabilizing | 0.944 | D | 0.685 | prob.neutral | None | None | None | None | I |
V/T | 0.4455 | ambiguous | 0.4684 | ambiguous | -1.452 | Destabilizing | 0.829 | D | 0.519 | neutral | None | None | None | None | I |
V/W | 0.9902 | likely_pathogenic | 0.9932 | pathogenic | -1.069 | Destabilizing | 0.985 | D | 0.757 | deleterious | None | None | None | None | I |
V/Y | 0.9503 | likely_pathogenic | 0.9638 | pathogenic | -0.751 | Destabilizing | 0.007 | N | 0.331 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.