Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2633979240;79241;79242 chr2:178567117;178567116;178567115chr2:179431844;179431843;179431842
N2AB2469874317;74318;74319 chr2:178567117;178567116;178567115chr2:179431844;179431843;179431842
N2A2377171536;71537;71538 chr2:178567117;178567116;178567115chr2:179431844;179431843;179431842
N2B1727452045;52046;52047 chr2:178567117;178567116;178567115chr2:179431844;179431843;179431842
Novex-11739952420;52421;52422 chr2:178567117;178567116;178567115chr2:179431844;179431843;179431842
Novex-21746652621;52622;52623 chr2:178567117;178567116;178567115chr2:179431844;179431843;179431842
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: TCA
  • RefSeq wild type template codon: AGT
  • Domain: Fn3-79
  • Domain position: 54
  • Structural Position: 70
  • Q(SASA): 0.5719
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/L None None 0.193 N 0.273 0.184 0.42069145522 gnomAD-4.0.0 2.40065E-06 None None None None I None 0 0 None 0 0 None 0 0 2.62501E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0738 likely_benign 0.0691 benign -0.346 Destabilizing 0.001 N 0.093 neutral N 0.455736832 None None I
S/C 0.1545 likely_benign 0.1454 benign -0.256 Destabilizing 0.944 D 0.333 neutral None None None None I
S/D 0.4368 ambiguous 0.4273 ambiguous -0.049 Destabilizing 0.388 N 0.195 neutral None None None None I
S/E 0.5399 ambiguous 0.5259 ambiguous -0.102 Destabilizing 0.116 N 0.199 neutral None None None None I
S/F 0.3371 likely_benign 0.331 benign -0.648 Destabilizing 0.818 D 0.331 neutral None None None None I
S/G 0.0763 likely_benign 0.0774 benign -0.542 Destabilizing 0.116 N 0.218 neutral None None None None I
S/H 0.4166 ambiguous 0.411 ambiguous -1.045 Destabilizing 0.818 D 0.339 neutral None None None None I
S/I 0.3358 likely_benign 0.3074 benign 0.049 Stabilizing 0.527 D 0.349 neutral None None None None I
S/K 0.6381 likely_pathogenic 0.6226 pathogenic -0.696 Destabilizing 0.241 N 0.197 neutral None None None None I
S/L 0.1231 likely_benign 0.1194 benign 0.049 Stabilizing 0.193 N 0.273 neutral N 0.508837811 None None I
S/M 0.2315 likely_benign 0.2185 benign 0.207 Stabilizing 0.818 D 0.337 neutral None None None None I
S/N 0.1338 likely_benign 0.1307 benign -0.441 Destabilizing 0.388 N 0.238 neutral None None None None I
S/P 0.1049 likely_benign 0.1036 benign -0.05 Destabilizing 0.001 N 0.151 neutral N 0.47478674 None None I
S/Q 0.4748 ambiguous 0.4667 ambiguous -0.621 Destabilizing 0.024 N 0.154 neutral None None None None I
S/R 0.6082 likely_pathogenic 0.6181 pathogenic -0.515 Destabilizing 0.388 N 0.349 neutral None None None None I
S/T 0.0889 likely_benign 0.0853 benign -0.475 Destabilizing 0.001 N 0.117 neutral N 0.439903375 None None I
S/V 0.2479 likely_benign 0.2322 benign -0.05 Destabilizing 0.241 N 0.277 neutral None None None None I
S/W 0.4809 ambiguous 0.4841 ambiguous -0.686 Destabilizing 0.981 D 0.406 neutral None None None None I
S/Y 0.3183 likely_benign 0.3087 benign -0.422 Destabilizing 0.932 D 0.331 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.