Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26339 | 79240;79241;79242 | chr2:178567117;178567116;178567115 | chr2:179431844;179431843;179431842 |
N2AB | 24698 | 74317;74318;74319 | chr2:178567117;178567116;178567115 | chr2:179431844;179431843;179431842 |
N2A | 23771 | 71536;71537;71538 | chr2:178567117;178567116;178567115 | chr2:179431844;179431843;179431842 |
N2B | 17274 | 52045;52046;52047 | chr2:178567117;178567116;178567115 | chr2:179431844;179431843;179431842 |
Novex-1 | 17399 | 52420;52421;52422 | chr2:178567117;178567116;178567115 | chr2:179431844;179431843;179431842 |
Novex-2 | 17466 | 52621;52622;52623 | chr2:178567117;178567116;178567115 | chr2:179431844;179431843;179431842 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.193 | N | 0.273 | 0.184 | 0.42069145522 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0738 | likely_benign | 0.0691 | benign | -0.346 | Destabilizing | 0.001 | N | 0.093 | neutral | N | 0.455736832 | None | None | I |
S/C | 0.1545 | likely_benign | 0.1454 | benign | -0.256 | Destabilizing | 0.944 | D | 0.333 | neutral | None | None | None | None | I |
S/D | 0.4368 | ambiguous | 0.4273 | ambiguous | -0.049 | Destabilizing | 0.388 | N | 0.195 | neutral | None | None | None | None | I |
S/E | 0.5399 | ambiguous | 0.5259 | ambiguous | -0.102 | Destabilizing | 0.116 | N | 0.199 | neutral | None | None | None | None | I |
S/F | 0.3371 | likely_benign | 0.331 | benign | -0.648 | Destabilizing | 0.818 | D | 0.331 | neutral | None | None | None | None | I |
S/G | 0.0763 | likely_benign | 0.0774 | benign | -0.542 | Destabilizing | 0.116 | N | 0.218 | neutral | None | None | None | None | I |
S/H | 0.4166 | ambiguous | 0.411 | ambiguous | -1.045 | Destabilizing | 0.818 | D | 0.339 | neutral | None | None | None | None | I |
S/I | 0.3358 | likely_benign | 0.3074 | benign | 0.049 | Stabilizing | 0.527 | D | 0.349 | neutral | None | None | None | None | I |
S/K | 0.6381 | likely_pathogenic | 0.6226 | pathogenic | -0.696 | Destabilizing | 0.241 | N | 0.197 | neutral | None | None | None | None | I |
S/L | 0.1231 | likely_benign | 0.1194 | benign | 0.049 | Stabilizing | 0.193 | N | 0.273 | neutral | N | 0.508837811 | None | None | I |
S/M | 0.2315 | likely_benign | 0.2185 | benign | 0.207 | Stabilizing | 0.818 | D | 0.337 | neutral | None | None | None | None | I |
S/N | 0.1338 | likely_benign | 0.1307 | benign | -0.441 | Destabilizing | 0.388 | N | 0.238 | neutral | None | None | None | None | I |
S/P | 0.1049 | likely_benign | 0.1036 | benign | -0.05 | Destabilizing | 0.001 | N | 0.151 | neutral | N | 0.47478674 | None | None | I |
S/Q | 0.4748 | ambiguous | 0.4667 | ambiguous | -0.621 | Destabilizing | 0.024 | N | 0.154 | neutral | None | None | None | None | I |
S/R | 0.6082 | likely_pathogenic | 0.6181 | pathogenic | -0.515 | Destabilizing | 0.388 | N | 0.349 | neutral | None | None | None | None | I |
S/T | 0.0889 | likely_benign | 0.0853 | benign | -0.475 | Destabilizing | 0.001 | N | 0.117 | neutral | N | 0.439903375 | None | None | I |
S/V | 0.2479 | likely_benign | 0.2322 | benign | -0.05 | Destabilizing | 0.241 | N | 0.277 | neutral | None | None | None | None | I |
S/W | 0.4809 | ambiguous | 0.4841 | ambiguous | -0.686 | Destabilizing | 0.981 | D | 0.406 | neutral | None | None | None | None | I |
S/Y | 0.3183 | likely_benign | 0.3087 | benign | -0.422 | Destabilizing | 0.932 | D | 0.331 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.