Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26340 | 79243;79244;79245 | chr2:178567114;178567113;178567112 | chr2:179431841;179431840;179431839 |
N2AB | 24699 | 74320;74321;74322 | chr2:178567114;178567113;178567112 | chr2:179431841;179431840;179431839 |
N2A | 23772 | 71539;71540;71541 | chr2:178567114;178567113;178567112 | chr2:179431841;179431840;179431839 |
N2B | 17275 | 52048;52049;52050 | chr2:178567114;178567113;178567112 | chr2:179431841;179431840;179431839 |
Novex-1 | 17400 | 52423;52424;52425 | chr2:178567114;178567113;178567112 | chr2:179431841;179431840;179431839 |
Novex-2 | 17467 | 52624;52625;52626 | chr2:178567114;178567113;178567112 | chr2:179431841;179431840;179431839 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.684 | N | 0.325 | 0.107 | 0.177238962908 | gnomAD-4.0.0 | 6.84306E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99583E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1781 | likely_benign | 0.1611 | benign | -0.399 | Destabilizing | 0.028 | N | 0.142 | neutral | N | 0.463935028 | None | None | I |
E/C | 0.8523 | likely_pathogenic | 0.8071 | pathogenic | -0.136 | Destabilizing | 0.996 | D | 0.245 | neutral | None | None | None | None | I |
E/D | 0.0969 | likely_benign | 0.0826 | benign | -0.293 | Destabilizing | 0.007 | N | 0.1 | neutral | N | 0.407406954 | None | None | I |
E/F | 0.8241 | likely_pathogenic | 0.7772 | pathogenic | -0.244 | Destabilizing | 0.953 | D | 0.285 | neutral | None | None | None | None | I |
E/G | 0.1959 | likely_benign | 0.1594 | benign | -0.603 | Destabilizing | 0.309 | N | 0.32 | neutral | N | 0.452256597 | None | None | I |
E/H | 0.4415 | ambiguous | 0.3785 | ambiguous | 0.026 | Stabilizing | 0.953 | D | 0.34 | neutral | None | None | None | None | I |
E/I | 0.5283 | ambiguous | 0.4869 | ambiguous | 0.107 | Stabilizing | 0.59 | D | 0.323 | neutral | None | None | None | None | I |
E/K | 0.2098 | likely_benign | 0.1824 | benign | 0.173 | Stabilizing | 0.684 | D | 0.266 | neutral | N | 0.449061576 | None | None | I |
E/L | 0.5367 | ambiguous | 0.4861 | ambiguous | 0.107 | Stabilizing | 0.59 | D | 0.343 | neutral | None | None | None | None | I |
E/M | 0.5556 | ambiguous | 0.5123 | ambiguous | 0.156 | Stabilizing | 0.953 | D | 0.258 | neutral | None | None | None | None | I |
E/N | 0.1612 | likely_benign | 0.1416 | benign | -0.088 | Destabilizing | 0.009 | N | 0.15 | neutral | None | None | None | None | I |
E/P | 0.7805 | likely_pathogenic | 0.7164 | pathogenic | -0.042 | Destabilizing | 0.953 | D | 0.359 | neutral | None | None | None | None | I |
E/Q | 0.1624 | likely_benign | 0.151 | benign | -0.049 | Destabilizing | 0.684 | D | 0.325 | neutral | N | 0.474498738 | None | None | I |
E/R | 0.3453 | ambiguous | 0.2992 | benign | 0.443 | Stabilizing | 0.91 | D | 0.335 | neutral | None | None | None | None | I |
E/S | 0.1708 | likely_benign | 0.1489 | benign | -0.289 | Destabilizing | 0.373 | N | 0.266 | neutral | None | None | None | None | I |
E/T | 0.2207 | likely_benign | 0.1982 | benign | -0.127 | Destabilizing | 0.742 | D | 0.323 | neutral | None | None | None | None | I |
E/V | 0.3108 | likely_benign | 0.2875 | benign | -0.042 | Destabilizing | 0.012 | N | 0.163 | neutral | N | 0.478115046 | None | None | I |
E/W | 0.939 | likely_pathogenic | 0.9066 | pathogenic | -0.092 | Destabilizing | 0.996 | D | 0.402 | neutral | None | None | None | None | I |
E/Y | 0.6794 | likely_pathogenic | 0.6022 | pathogenic | -0.008 | Destabilizing | 0.984 | D | 0.277 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.