Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26342 | 79249;79250;79251 | chr2:178567108;178567107;178567106 | chr2:179431835;179431834;179431833 |
N2AB | 24701 | 74326;74327;74328 | chr2:178567108;178567107;178567106 | chr2:179431835;179431834;179431833 |
N2A | 23774 | 71545;71546;71547 | chr2:178567108;178567107;178567106 | chr2:179431835;179431834;179431833 |
N2B | 17277 | 52054;52055;52056 | chr2:178567108;178567107;178567106 | chr2:179431835;179431834;179431833 |
Novex-1 | 17402 | 52429;52430;52431 | chr2:178567108;178567107;178567106 | chr2:179431835;179431834;179431833 |
Novex-2 | 17469 | 52630;52631;52632 | chr2:178567108;178567107;178567106 | chr2:179431835;179431834;179431833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.983 | N | 0.547 | 0.449 | 0.572556545866 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1056 | likely_benign | 0.1101 | benign | -0.671 | Destabilizing | 0.892 | D | 0.456 | neutral | N | 0.421298971 | None | None | I |
V/C | 0.5777 | likely_pathogenic | 0.6082 | pathogenic | -0.743 | Destabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | I |
V/D | 0.2876 | likely_benign | 0.3017 | benign | -0.274 | Destabilizing | 0.996 | D | 0.584 | neutral | None | None | None | None | I |
V/E | 0.1991 | likely_benign | 0.2187 | benign | -0.352 | Destabilizing | 0.983 | D | 0.547 | neutral | N | 0.389783986 | None | None | I |
V/F | 0.135 | likely_benign | 0.1364 | benign | -0.658 | Destabilizing | 0.975 | D | 0.568 | neutral | None | None | None | None | I |
V/G | 0.1238 | likely_benign | 0.1327 | benign | -0.853 | Destabilizing | 0.983 | D | 0.582 | neutral | N | 0.431150606 | None | None | I |
V/H | 0.3827 | ambiguous | 0.4172 | ambiguous | -0.276 | Destabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | I |
V/I | 0.0706 | likely_benign | 0.0684 | benign | -0.327 | Destabilizing | 0.693 | D | 0.427 | neutral | None | None | None | None | I |
V/K | 0.199 | likely_benign | 0.2251 | benign | -0.613 | Destabilizing | 0.987 | D | 0.548 | neutral | None | None | None | None | I |
V/L | 0.1117 | likely_benign | 0.1109 | benign | -0.327 | Destabilizing | 0.011 | N | 0.177 | neutral | N | 0.448640288 | None | None | I |
V/M | 0.0947 | likely_benign | 0.0987 | benign | -0.423 | Destabilizing | 0.967 | D | 0.525 | neutral | N | 0.44558134 | None | None | I |
V/N | 0.1573 | likely_benign | 0.1706 | benign | -0.44 | Destabilizing | 0.996 | D | 0.583 | neutral | None | None | None | None | I |
V/P | 0.2179 | likely_benign | 0.2046 | benign | -0.406 | Destabilizing | 0.996 | D | 0.537 | neutral | None | None | None | None | I |
V/Q | 0.1757 | likely_benign | 0.1962 | benign | -0.633 | Destabilizing | 0.996 | D | 0.541 | neutral | None | None | None | None | I |
V/R | 0.2146 | likely_benign | 0.2454 | benign | -0.088 | Destabilizing | 0.987 | D | 0.584 | neutral | None | None | None | None | I |
V/S | 0.124 | likely_benign | 0.1309 | benign | -0.866 | Destabilizing | 0.987 | D | 0.547 | neutral | None | None | None | None | I |
V/T | 0.1107 | likely_benign | 0.1181 | benign | -0.836 | Destabilizing | 0.916 | D | 0.491 | neutral | None | None | None | None | I |
V/W | 0.6882 | likely_pathogenic | 0.7086 | pathogenic | -0.749 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | I |
V/Y | 0.4215 | ambiguous | 0.4258 | ambiguous | -0.464 | Destabilizing | 0.987 | D | 0.557 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.