Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26343 | 79252;79253;79254 | chr2:178567105;178567104;178567103 | chr2:179431832;179431831;179431830 |
N2AB | 24702 | 74329;74330;74331 | chr2:178567105;178567104;178567103 | chr2:179431832;179431831;179431830 |
N2A | 23775 | 71548;71549;71550 | chr2:178567105;178567104;178567103 | chr2:179431832;179431831;179431830 |
N2B | 17278 | 52057;52058;52059 | chr2:178567105;178567104;178567103 | chr2:179431832;179431831;179431830 |
Novex-1 | 17403 | 52432;52433;52434 | chr2:178567105;178567104;178567103 | chr2:179431832;179431831;179431830 |
Novex-2 | 17470 | 52633;52634;52635 | chr2:178567105;178567104;178567103 | chr2:179431832;179431831;179431830 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs765936549 | 0.131 | 0.934 | N | 0.42 | 0.444 | 0.419090007872 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
T/I | rs765936549 | 0.131 | 0.934 | N | 0.42 | 0.444 | 0.419090007872 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
T/I | rs765936549 | 0.131 | 0.934 | N | 0.42 | 0.444 | 0.419090007872 | gnomAD-4.0.0 | 4.21473E-05 | None | None | None | None | N | None | 0 | 1.66772E-05 | None | 0 | 0 | None | 0 | 0 | 5.67985E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0684 | likely_benign | 0.0665 | benign | -0.657 | Destabilizing | 0.005 | N | 0.105 | neutral | N | 0.438271366 | None | None | N |
T/C | 0.3051 | likely_benign | 0.3448 | ambiguous | -0.498 | Destabilizing | 0.993 | D | 0.385 | neutral | None | None | None | None | N |
T/D | 0.4425 | ambiguous | 0.4364 | ambiguous | 0.148 | Stabilizing | 0.915 | D | 0.393 | neutral | None | None | None | None | N |
T/E | 0.3819 | ambiguous | 0.3756 | ambiguous | 0.172 | Stabilizing | 0.842 | D | 0.413 | neutral | None | None | None | None | N |
T/F | 0.2754 | likely_benign | 0.2825 | benign | -0.889 | Destabilizing | 0.974 | D | 0.455 | neutral | None | None | None | None | N |
T/G | 0.156 | likely_benign | 0.1615 | benign | -0.892 | Destabilizing | 0.728 | D | 0.423 | neutral | None | None | None | None | N |
T/H | 0.2753 | likely_benign | 0.2824 | benign | -0.941 | Destabilizing | 0.998 | D | 0.441 | neutral | None | None | None | None | N |
T/I | 0.2031 | likely_benign | 0.2033 | benign | -0.127 | Destabilizing | 0.934 | D | 0.42 | neutral | N | 0.475539976 | None | None | N |
T/K | 0.2869 | likely_benign | 0.2769 | benign | -0.393 | Destabilizing | 0.842 | D | 0.411 | neutral | None | None | None | None | N |
T/L | 0.1092 | likely_benign | 0.1091 | benign | -0.127 | Destabilizing | 0.842 | D | 0.387 | neutral | None | None | None | None | N |
T/M | 0.0885 | likely_benign | 0.0919 | benign | -0.216 | Destabilizing | 0.998 | D | 0.394 | neutral | None | None | None | None | N |
T/N | 0.1104 | likely_benign | 0.1169 | benign | -0.509 | Destabilizing | 0.966 | D | 0.401 | neutral | N | 0.499437255 | None | None | N |
T/P | 0.1255 | likely_benign | 0.1066 | benign | -0.272 | Destabilizing | 0.005 | N | 0.201 | neutral | N | 0.473133666 | None | None | N |
T/Q | 0.2339 | likely_benign | 0.2376 | benign | -0.531 | Destabilizing | 0.974 | D | 0.43 | neutral | None | None | None | None | N |
T/R | 0.2604 | likely_benign | 0.2457 | benign | -0.196 | Destabilizing | 0.974 | D | 0.423 | neutral | None | None | None | None | N |
T/S | 0.0921 | likely_benign | 0.0978 | benign | -0.789 | Destabilizing | 0.454 | N | 0.375 | neutral | N | 0.448931077 | None | None | N |
T/V | 0.14 | likely_benign | 0.1413 | benign | -0.272 | Destabilizing | 0.728 | D | 0.328 | neutral | None | None | None | None | N |
T/W | 0.6096 | likely_pathogenic | 0.6222 | pathogenic | -0.924 | Destabilizing | 0.998 | D | 0.564 | neutral | None | None | None | None | N |
T/Y | 0.3276 | likely_benign | 0.3277 | benign | -0.615 | Destabilizing | 0.991 | D | 0.453 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.