Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26348 | 79267;79268;79269 | chr2:178567090;178567089;178567088 | chr2:179431817;179431816;179431815 |
N2AB | 24707 | 74344;74345;74346 | chr2:178567090;178567089;178567088 | chr2:179431817;179431816;179431815 |
N2A | 23780 | 71563;71564;71565 | chr2:178567090;178567089;178567088 | chr2:179431817;179431816;179431815 |
N2B | 17283 | 52072;52073;52074 | chr2:178567090;178567089;178567088 | chr2:179431817;179431816;179431815 |
Novex-1 | 17408 | 52447;52448;52449 | chr2:178567090;178567089;178567088 | chr2:179431817;179431816;179431815 |
Novex-2 | 17475 | 52648;52649;52650 | chr2:178567090;178567089;178567088 | chr2:179431817;179431816;179431815 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1341655578 | -2.228 | 0.581 | D | 0.653 | 0.415 | 0.564579235405 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
V/A | rs1341655578 | -2.228 | 0.581 | D | 0.653 | 0.415 | 0.564579235405 | gnomAD-4.0.0 | 2.0529E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6734 | likely_pathogenic | 0.6555 | pathogenic | -1.791 | Destabilizing | 0.581 | D | 0.653 | neutral | D | 0.525586493 | None | None | N |
V/C | 0.9148 | likely_pathogenic | 0.9085 | pathogenic | -1.278 | Destabilizing | 0.993 | D | 0.842 | deleterious | None | None | None | None | N |
V/D | 0.9936 | likely_pathogenic | 0.9949 | pathogenic | -1.843 | Destabilizing | 0.908 | D | 0.833 | deleterious | N | 0.508776426 | None | None | N |
V/E | 0.9799 | likely_pathogenic | 0.9846 | pathogenic | -1.676 | Destabilizing | 0.929 | D | 0.839 | deleterious | None | None | None | None | N |
V/F | 0.7135 | likely_pathogenic | 0.743 | pathogenic | -1.102 | Destabilizing | 0.83 | D | 0.814 | deleterious | N | 0.501126195 | None | None | N |
V/G | 0.8933 | likely_pathogenic | 0.8963 | pathogenic | -2.285 | Highly Destabilizing | 0.908 | D | 0.848 | deleterious | D | 0.550518344 | None | None | N |
V/H | 0.9928 | likely_pathogenic | 0.9941 | pathogenic | -1.887 | Destabilizing | 0.993 | D | 0.88 | deleterious | None | None | None | None | N |
V/I | 0.0784 | likely_benign | 0.0832 | benign | -0.452 | Destabilizing | 0.004 | N | 0.239 | neutral | N | 0.473634733 | None | None | N |
V/K | 0.9896 | likely_pathogenic | 0.9924 | pathogenic | -1.463 | Destabilizing | 0.929 | D | 0.84 | deleterious | None | None | None | None | N |
V/L | 0.5377 | ambiguous | 0.5864 | pathogenic | -0.452 | Destabilizing | 0.09 | N | 0.631 | neutral | N | 0.470657541 | None | None | N |
V/M | 0.5403 | ambiguous | 0.5595 | ambiguous | -0.42 | Destabilizing | 0.866 | D | 0.757 | deleterious | None | None | None | None | N |
V/N | 0.9715 | likely_pathogenic | 0.977 | pathogenic | -1.604 | Destabilizing | 0.976 | D | 0.886 | deleterious | None | None | None | None | N |
V/P | 0.9772 | likely_pathogenic | 0.9831 | pathogenic | -0.867 | Destabilizing | 0.976 | D | 0.836 | deleterious | None | None | None | None | N |
V/Q | 0.98 | likely_pathogenic | 0.9838 | pathogenic | -1.515 | Destabilizing | 0.976 | D | 0.895 | deleterious | None | None | None | None | N |
V/R | 0.9844 | likely_pathogenic | 0.9879 | pathogenic | -1.239 | Destabilizing | 0.929 | D | 0.89 | deleterious | None | None | None | None | N |
V/S | 0.9142 | likely_pathogenic | 0.9146 | pathogenic | -2.256 | Highly Destabilizing | 0.929 | D | 0.841 | deleterious | None | None | None | None | N |
V/T | 0.8179 | likely_pathogenic | 0.8201 | pathogenic | -1.937 | Destabilizing | 0.648 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/W | 0.9941 | likely_pathogenic | 0.9949 | pathogenic | -1.49 | Destabilizing | 0.993 | D | 0.868 | deleterious | None | None | None | None | N |
V/Y | 0.9697 | likely_pathogenic | 0.9711 | pathogenic | -1.104 | Destabilizing | 0.929 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.