Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2636 | 8131;8132;8133 | chr2:178771421;178771420;178771419 | chr2:179636148;179636147;179636146 |
N2AB | 2636 | 8131;8132;8133 | chr2:178771421;178771420;178771419 | chr2:179636148;179636147;179636146 |
N2A | 2636 | 8131;8132;8133 | chr2:178771421;178771420;178771419 | chr2:179636148;179636147;179636146 |
N2B | 2590 | 7993;7994;7995 | chr2:178771421;178771420;178771419 | chr2:179636148;179636147;179636146 |
Novex-1 | 2590 | 7993;7994;7995 | chr2:178771421;178771420;178771419 | chr2:179636148;179636147;179636146 |
Novex-2 | 2590 | 7993;7994;7995 | chr2:178771421;178771420;178771419 | chr2:179636148;179636147;179636146 |
Novex-3 | 2636 | 8131;8132;8133 | chr2:178771421;178771420;178771419 | chr2:179636148;179636147;179636146 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs1207371966 | 0.189 | 0.01 | N | 0.228 | 0.335 | 0.417208245017 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
E/V | rs1207371966 | 0.189 | 0.01 | N | 0.228 | 0.335 | 0.417208245017 | gnomAD-4.0.0 | 3.18187E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.715E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1279 | likely_benign | 0.1362 | benign | -0.847 | Destabilizing | 0.139 | N | 0.253 | neutral | N | 0.445197897 | None | None | N |
E/C | 0.8483 | likely_pathogenic | 0.8542 | pathogenic | -0.383 | Destabilizing | 0.995 | D | 0.322 | neutral | None | None | None | None | N |
E/D | 0.1686 | likely_benign | 0.1736 | benign | -0.762 | Destabilizing | 0.425 | N | 0.301 | neutral | N | 0.431115871 | None | None | N |
E/F | 0.7265 | likely_pathogenic | 0.7319 | pathogenic | -0.381 | Destabilizing | 0.944 | D | 0.378 | neutral | None | None | None | None | N |
E/G | 0.1741 | likely_benign | 0.1738 | benign | -1.145 | Destabilizing | 0.425 | N | 0.361 | neutral | N | 0.504062077 | None | None | N |
E/H | 0.493 | ambiguous | 0.4927 | ambiguous | -0.359 | Destabilizing | 0.944 | D | 0.369 | neutral | None | None | None | None | N |
E/I | 0.2911 | likely_benign | 0.3047 | benign | -0.053 | Destabilizing | 0.543 | D | 0.424 | neutral | None | None | None | None | N |
E/K | 0.1208 | likely_benign | 0.1216 | benign | -0.203 | Destabilizing | 0.27 | N | 0.296 | neutral | N | 0.43158041 | None | None | N |
E/L | 0.3064 | likely_benign | 0.3172 | benign | -0.053 | Destabilizing | 0.329 | N | 0.332 | neutral | None | None | None | None | N |
E/M | 0.3595 | ambiguous | 0.3716 | ambiguous | 0.24 | Stabilizing | 0.944 | D | 0.339 | neutral | None | None | None | None | N |
E/N | 0.2672 | likely_benign | 0.2809 | benign | -0.716 | Destabilizing | 0.704 | D | 0.289 | neutral | None | None | None | None | N |
E/P | 0.4379 | ambiguous | 0.4419 | ambiguous | -0.297 | Destabilizing | 0.828 | D | 0.416 | neutral | None | None | None | None | N |
E/Q | 0.1436 | likely_benign | 0.1452 | benign | -0.637 | Destabilizing | 0.023 | N | 0.163 | neutral | N | 0.452411247 | None | None | N |
E/R | 0.227 | likely_benign | 0.2198 | benign | 0.122 | Stabilizing | 0.007 | N | 0.17 | neutral | None | None | None | None | N |
E/S | 0.2077 | likely_benign | 0.2237 | benign | -0.948 | Destabilizing | 0.329 | N | 0.283 | neutral | None | None | None | None | N |
E/T | 0.1565 | likely_benign | 0.1651 | benign | -0.7 | Destabilizing | 0.004 | N | 0.183 | neutral | None | None | None | None | N |
E/V | 0.1615 | likely_benign | 0.167 | benign | -0.297 | Destabilizing | 0.01 | N | 0.228 | neutral | N | 0.479132707 | None | None | N |
E/W | 0.8843 | likely_pathogenic | 0.878 | pathogenic | -0.087 | Destabilizing | 0.995 | D | 0.335 | neutral | None | None | None | None | N |
E/Y | 0.6035 | likely_pathogenic | 0.5969 | pathogenic | -0.111 | Destabilizing | 0.981 | D | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.