Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26361 | 79306;79307;79308 | chr2:178567051;178567050;178567049 | chr2:179431778;179431777;179431776 |
N2AB | 24720 | 74383;74384;74385 | chr2:178567051;178567050;178567049 | chr2:179431778;179431777;179431776 |
N2A | 23793 | 71602;71603;71604 | chr2:178567051;178567050;178567049 | chr2:179431778;179431777;179431776 |
N2B | 17296 | 52111;52112;52113 | chr2:178567051;178567050;178567049 | chr2:179431778;179431777;179431776 |
Novex-1 | 17421 | 52486;52487;52488 | chr2:178567051;178567050;178567049 | chr2:179431778;179431777;179431776 |
Novex-2 | 17488 | 52687;52688;52689 | chr2:178567051;178567050;178567049 | chr2:179431778;179431777;179431776 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs776297490 | -2.316 | 0.782 | N | 0.603 | 0.362 | 0.53832913131 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
I/M | rs776297490 | -2.316 | 0.782 | N | 0.603 | 0.362 | 0.53832913131 | gnomAD-4.0.0 | 1.16326E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52925E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9553 | likely_pathogenic | 0.9565 | pathogenic | -3.172 | Highly Destabilizing | 0.218 | N | 0.592 | neutral | None | None | None | None | N |
I/C | 0.9412 | likely_pathogenic | 0.942 | pathogenic | -2.371 | Highly Destabilizing | 0.973 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/D | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -3.925 | Highly Destabilizing | 0.906 | D | 0.837 | deleterious | None | None | None | None | N |
I/E | 0.9982 | likely_pathogenic | 0.9983 | pathogenic | -3.627 | Highly Destabilizing | 0.906 | D | 0.821 | deleterious | None | None | None | None | N |
I/F | 0.7493 | likely_pathogenic | 0.759 | pathogenic | -1.962 | Destabilizing | 0.826 | D | 0.606 | neutral | None | None | None | None | N |
I/G | 0.9933 | likely_pathogenic | 0.9937 | pathogenic | -3.718 | Highly Destabilizing | 0.906 | D | 0.802 | deleterious | None | None | None | None | N |
I/H | 0.9979 | likely_pathogenic | 0.9979 | pathogenic | -3.228 | Highly Destabilizing | 0.991 | D | 0.85 | deleterious | None | None | None | None | N |
I/K | 0.9965 | likely_pathogenic | 0.9967 | pathogenic | -2.674 | Highly Destabilizing | 0.879 | D | 0.823 | deleterious | N | 0.51105415 | None | None | N |
I/L | 0.3253 | likely_benign | 0.3586 | ambiguous | -1.504 | Destabilizing | 0.084 | N | 0.258 | neutral | N | 0.508400668 | None | None | N |
I/M | 0.4257 | ambiguous | 0.4439 | ambiguous | -1.629 | Destabilizing | 0.782 | D | 0.603 | neutral | N | 0.499190866 | None | None | N |
I/N | 0.9918 | likely_pathogenic | 0.9922 | pathogenic | -3.353 | Highly Destabilizing | 0.967 | D | 0.857 | deleterious | None | None | None | None | N |
I/P | 0.9963 | likely_pathogenic | 0.9967 | pathogenic | -2.056 | Highly Destabilizing | 0.967 | D | 0.843 | deleterious | None | None | None | None | N |
I/Q | 0.9969 | likely_pathogenic | 0.997 | pathogenic | -3.068 | Highly Destabilizing | 0.967 | D | 0.86 | deleterious | None | None | None | None | N |
I/R | 0.9948 | likely_pathogenic | 0.9951 | pathogenic | -2.517 | Highly Destabilizing | 0.879 | D | 0.859 | deleterious | N | 0.51105415 | None | None | N |
I/S | 0.9851 | likely_pathogenic | 0.9851 | pathogenic | -3.855 | Highly Destabilizing | 0.826 | D | 0.767 | deleterious | None | None | None | None | N |
I/T | 0.9595 | likely_pathogenic | 0.9589 | pathogenic | -3.418 | Highly Destabilizing | 0.505 | D | 0.535 | neutral | N | 0.499444355 | None | None | N |
I/V | 0.085 | likely_benign | 0.0867 | benign | -2.056 | Highly Destabilizing | None | N | 0.197 | neutral | N | 0.322232763 | None | None | N |
I/W | 0.997 | likely_pathogenic | 0.9975 | pathogenic | -2.332 | Highly Destabilizing | 0.991 | D | 0.825 | deleterious | None | None | None | None | N |
I/Y | 0.9858 | likely_pathogenic | 0.9865 | pathogenic | -2.212 | Highly Destabilizing | 0.906 | D | 0.692 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.