Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26367 | 79324;79325;79326 | chr2:178567033;178567032;178567031 | chr2:179431760;179431759;179431758 |
N2AB | 24726 | 74401;74402;74403 | chr2:178567033;178567032;178567031 | chr2:179431760;179431759;179431758 |
N2A | 23799 | 71620;71621;71622 | chr2:178567033;178567032;178567031 | chr2:179431760;179431759;179431758 |
N2B | 17302 | 52129;52130;52131 | chr2:178567033;178567032;178567031 | chr2:179431760;179431759;179431758 |
Novex-1 | 17427 | 52504;52505;52506 | chr2:178567033;178567032;178567031 | chr2:179431760;179431759;179431758 |
Novex-2 | 17494 | 52705;52706;52707 | chr2:178567033;178567032;178567031 | chr2:179431760;179431759;179431758 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1317943530 | 0.233 | 0.997 | N | 0.718 | 0.356 | 0.46289702323 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 5.79E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs1317943530 | 0.233 | 0.997 | N | 0.718 | 0.356 | 0.46289702323 | gnomAD-4.0.0 | 3.18317E-06 | None | None | None | None | I | None | 0 | 4.57268E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | rs772020430 | 0.445 | 0.99 | N | 0.515 | 0.369 | 0.346544149963 | gnomAD-4.0.0 | 7.202E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87507E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9706 | likely_pathogenic | 0.9695 | pathogenic | -0.649 | Destabilizing | 0.86 | D | 0.646 | neutral | None | None | None | None | I |
Y/C | 0.7709 | likely_pathogenic | 0.7574 | pathogenic | 0.066 | Stabilizing | 0.997 | D | 0.718 | prob.delet. | N | 0.470532637 | None | None | I |
Y/D | 0.9738 | likely_pathogenic | 0.9778 | pathogenic | 1.066 | Stabilizing | 0.99 | D | 0.699 | prob.neutral | N | 0.494331204 | None | None | I |
Y/E | 0.9904 | likely_pathogenic | 0.9921 | pathogenic | 1.052 | Stabilizing | 0.993 | D | 0.69 | prob.neutral | None | None | None | None | I |
Y/F | 0.1328 | likely_benign | 0.1219 | benign | -0.291 | Destabilizing | 0.014 | N | 0.231 | neutral | N | 0.472381153 | None | None | I |
Y/G | 0.9662 | likely_pathogenic | 0.9639 | pathogenic | -0.839 | Destabilizing | 0.978 | D | 0.65 | neutral | None | None | None | None | I |
Y/H | 0.7394 | likely_pathogenic | 0.7708 | pathogenic | 0.232 | Stabilizing | 0.99 | D | 0.515 | neutral | N | 0.469923526 | None | None | I |
Y/I | 0.9074 | likely_pathogenic | 0.9012 | pathogenic | -0.174 | Destabilizing | 0.043 | N | 0.398 | neutral | None | None | None | None | I |
Y/K | 0.9843 | likely_pathogenic | 0.9849 | pathogenic | 0.244 | Stabilizing | 0.978 | D | 0.693 | prob.neutral | None | None | None | None | I |
Y/L | 0.915 | likely_pathogenic | 0.8994 | pathogenic | -0.174 | Destabilizing | 0.303 | N | 0.598 | neutral | None | None | None | None | I |
Y/M | 0.9326 | likely_pathogenic | 0.9197 | pathogenic | -0.049 | Destabilizing | 0.956 | D | 0.613 | neutral | None | None | None | None | I |
Y/N | 0.8386 | likely_pathogenic | 0.8613 | pathogenic | 0.076 | Stabilizing | 0.99 | D | 0.694 | prob.neutral | N | 0.471872083 | None | None | I |
Y/P | 0.9971 | likely_pathogenic | 0.9975 | pathogenic | -0.313 | Destabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | I |
Y/Q | 0.9752 | likely_pathogenic | 0.9772 | pathogenic | 0.126 | Stabilizing | 0.993 | D | 0.617 | neutral | None | None | None | None | I |
Y/R | 0.9589 | likely_pathogenic | 0.9594 | pathogenic | 0.486 | Stabilizing | 0.993 | D | 0.697 | prob.neutral | None | None | None | None | I |
Y/S | 0.9369 | likely_pathogenic | 0.9379 | pathogenic | -0.41 | Destabilizing | 0.97 | D | 0.631 | neutral | N | 0.463909592 | None | None | I |
Y/T | 0.9748 | likely_pathogenic | 0.9775 | pathogenic | -0.331 | Destabilizing | 0.956 | D | 0.634 | neutral | None | None | None | None | I |
Y/V | 0.8625 | likely_pathogenic | 0.8498 | pathogenic | -0.313 | Destabilizing | 0.514 | D | 0.591 | neutral | None | None | None | None | I |
Y/W | 0.7216 | likely_pathogenic | 0.6907 | pathogenic | -0.394 | Destabilizing | 0.998 | D | 0.51 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.