Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26369 | 79330;79331;79332 | chr2:178567027;178567026;178567025 | chr2:179431754;179431753;179431752 |
N2AB | 24728 | 74407;74408;74409 | chr2:178567027;178567026;178567025 | chr2:179431754;179431753;179431752 |
N2A | 23801 | 71626;71627;71628 | chr2:178567027;178567026;178567025 | chr2:179431754;179431753;179431752 |
N2B | 17304 | 52135;52136;52137 | chr2:178567027;178567026;178567025 | chr2:179431754;179431753;179431752 |
Novex-1 | 17429 | 52510;52511;52512 | chr2:178567027;178567026;178567025 | chr2:179431754;179431753;179431752 |
Novex-2 | 17496 | 52711;52712;52713 | chr2:178567027;178567026;178567025 | chr2:179431754;179431753;179431752 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.062 | N | 0.571 | 0.217 | 0.57186346447 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs778729064 | -0.685 | None | N | 0.257 | 0.056 | 0.195762928549 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 1.31079E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
V/I | rs778729064 | -0.685 | None | N | 0.257 | 0.056 | 0.195762928549 | gnomAD-4.0.0 | 8.96861E-06 | None | None | None | None | I | None | 0 | 3.38903E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.42207E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1119 | likely_benign | 0.1306 | benign | -1.174 | Destabilizing | None | N | 0.247 | neutral | N | 0.492409708 | None | None | I |
V/C | 0.6001 | likely_pathogenic | 0.6282 | pathogenic | -0.926 | Destabilizing | 0.824 | D | 0.566 | neutral | None | None | None | None | I |
V/D | 0.4497 | ambiguous | 0.4936 | ambiguous | -0.758 | Destabilizing | None | N | 0.513 | neutral | N | 0.465012455 | None | None | I |
V/E | 0.3365 | likely_benign | 0.3673 | ambiguous | -0.828 | Destabilizing | 0.002 | N | 0.478 | neutral | None | None | None | None | I |
V/F | 0.1653 | likely_benign | 0.1759 | benign | -1.096 | Destabilizing | 0.317 | N | 0.585 | neutral | N | 0.47967367 | None | None | I |
V/G | 0.224 | likely_benign | 0.2628 | benign | -1.398 | Destabilizing | 0.062 | N | 0.571 | neutral | N | 0.480456911 | None | None | I |
V/H | 0.5709 | likely_pathogenic | 0.5875 | pathogenic | -0.769 | Destabilizing | 0.935 | D | 0.617 | neutral | None | None | None | None | I |
V/I | 0.0661 | likely_benign | 0.0634 | benign | -0.699 | Destabilizing | None | N | 0.257 | neutral | N | 0.44733078 | None | None | I |
V/K | 0.3584 | ambiguous | 0.3819 | ambiguous | -0.859 | Destabilizing | 0.149 | N | 0.614 | neutral | None | None | None | None | I |
V/L | 0.1747 | likely_benign | 0.1585 | benign | -0.699 | Destabilizing | 0.009 | N | 0.465 | neutral | N | 0.472399795 | None | None | I |
V/M | 0.1282 | likely_benign | 0.1295 | benign | -0.561 | Destabilizing | 0.38 | N | 0.597 | neutral | None | None | None | None | I |
V/N | 0.2815 | likely_benign | 0.295 | benign | -0.601 | Destabilizing | 0.38 | N | 0.609 | neutral | None | None | None | None | I |
V/P | 0.3204 | likely_benign | 0.3436 | ambiguous | -0.821 | Destabilizing | 0.38 | N | 0.613 | neutral | None | None | None | None | I |
V/Q | 0.3268 | likely_benign | 0.3412 | ambiguous | -0.873 | Destabilizing | 0.38 | N | 0.621 | neutral | None | None | None | None | I |
V/R | 0.3052 | likely_benign | 0.3311 | benign | -0.245 | Destabilizing | 0.38 | N | 0.623 | neutral | None | None | None | None | I |
V/S | 0.1647 | likely_benign | 0.1983 | benign | -1.102 | Destabilizing | 0.081 | N | 0.568 | neutral | None | None | None | None | I |
V/T | 0.1124 | likely_benign | 0.1132 | benign | -1.067 | Destabilizing | 0.001 | N | 0.221 | neutral | None | None | None | None | I |
V/W | 0.7745 | likely_pathogenic | 0.7831 | pathogenic | -1.127 | Destabilizing | 0.935 | D | 0.661 | neutral | None | None | None | None | I |
V/Y | 0.5237 | ambiguous | 0.5275 | ambiguous | -0.865 | Destabilizing | 0.555 | D | 0.581 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.