Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2637 | 8134;8135;8136 | chr2:178771418;178771417;178771416 | chr2:179636145;179636144;179636143 |
N2AB | 2637 | 8134;8135;8136 | chr2:178771418;178771417;178771416 | chr2:179636145;179636144;179636143 |
N2A | 2637 | 8134;8135;8136 | chr2:178771418;178771417;178771416 | chr2:179636145;179636144;179636143 |
N2B | 2591 | 7996;7997;7998 | chr2:178771418;178771417;178771416 | chr2:179636145;179636144;179636143 |
Novex-1 | 2591 | 7996;7997;7998 | chr2:178771418;178771417;178771416 | chr2:179636145;179636144;179636143 |
Novex-2 | 2591 | 7996;7997;7998 | chr2:178771418;178771417;178771416 | chr2:179636145;179636144;179636143 |
Novex-3 | 2637 | 8134;8135;8136 | chr2:178771418;178771417;178771416 | chr2:179636145;179636144;179636143 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 1.0 | N | 0.615 | 0.424 | 0.305086939656 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7691 | likely_pathogenic | 0.7773 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
A/D | 0.9625 | likely_pathogenic | 0.9437 | pathogenic | -1.49 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.498141573 | None | None | N |
A/E | 0.9459 | likely_pathogenic | 0.9204 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
A/F | 0.907 | likely_pathogenic | 0.8937 | pathogenic | -0.598 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
A/G | 0.3613 | ambiguous | 0.3547 | ambiguous | -1.281 | Destabilizing | 1.0 | D | 0.563 | neutral | N | 0.460795797 | None | None | N |
A/H | 0.9811 | likely_pathogenic | 0.9731 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
A/I | 0.5165 | ambiguous | 0.5278 | ambiguous | 0.263 | Stabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
A/K | 0.9851 | likely_pathogenic | 0.976 | pathogenic | -1.085 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
A/L | 0.5926 | likely_pathogenic | 0.5842 | pathogenic | 0.263 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
A/M | 0.6098 | likely_pathogenic | 0.6034 | pathogenic | 0.118 | Stabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
A/N | 0.9324 | likely_pathogenic | 0.9081 | pathogenic | -1.144 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
A/P | 0.9868 | likely_pathogenic | 0.9733 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.878 | deleterious | N | 0.498141573 | None | None | N |
A/Q | 0.9524 | likely_pathogenic | 0.9338 | pathogenic | -1.041 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
A/R | 0.9716 | likely_pathogenic | 0.9577 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
A/S | 0.2726 | likely_benign | 0.2725 | benign | -1.607 | Destabilizing | 1.0 | D | 0.585 | neutral | N | 0.326423869 | None | None | N |
A/T | 0.2304 | likely_benign | 0.2355 | benign | -1.343 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.36211135 | None | None | N |
A/V | 0.2152 | likely_benign | 0.2218 | benign | -0.061 | Destabilizing | 1.0 | D | 0.615 | neutral | N | 0.349065652 | None | None | N |
A/W | 0.9924 | likely_pathogenic | 0.9893 | pathogenic | -1.259 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
A/Y | 0.9633 | likely_pathogenic | 0.9542 | pathogenic | -0.686 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.