Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26373 | 79342;79343;79344 | chr2:178567015;178567014;178567013 | chr2:179431742;179431741;179431740 |
N2AB | 24732 | 74419;74420;74421 | chr2:178567015;178567014;178567013 | chr2:179431742;179431741;179431740 |
N2A | 23805 | 71638;71639;71640 | chr2:178567015;178567014;178567013 | chr2:179431742;179431741;179431740 |
N2B | 17308 | 52147;52148;52149 | chr2:178567015;178567014;178567013 | chr2:179431742;179431741;179431740 |
Novex-1 | 17433 | 52522;52523;52524 | chr2:178567015;178567014;178567013 | chr2:179431742;179431741;179431740 |
Novex-2 | 17500 | 52723;52724;52725 | chr2:178567015;178567014;178567013 | chr2:179431742;179431741;179431740 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 0.998 | D | 0.741 | 0.268 | 0.483596354421 | gnomAD-4.0.0 | 4.77468E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71808E-06 | 0 | 3.0259E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4419 | ambiguous | 0.4502 | ambiguous | -2.261 | Highly Destabilizing | 0.938 | D | 0.617 | neutral | None | None | None | None | N |
L/C | 0.5977 | likely_pathogenic | 0.6089 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
L/D | 0.9874 | likely_pathogenic | 0.987 | pathogenic | -2.258 | Highly Destabilizing | 0.991 | D | 0.839 | deleterious | None | None | None | None | N |
L/E | 0.8418 | likely_pathogenic | 0.8512 | pathogenic | -2.122 | Highly Destabilizing | 0.991 | D | 0.813 | deleterious | None | None | None | None | N |
L/F | 0.702 | likely_pathogenic | 0.6842 | pathogenic | -1.352 | Destabilizing | 0.994 | D | 0.738 | prob.delet. | D | 0.53774105 | None | None | N |
L/G | 0.861 | likely_pathogenic | 0.8702 | pathogenic | -2.721 | Highly Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
L/H | 0.8325 | likely_pathogenic | 0.8444 | pathogenic | -2.099 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/I | 0.1648 | likely_benign | 0.1804 | benign | -0.981 | Destabilizing | 0.968 | D | 0.608 | neutral | None | None | None | None | N |
L/K | 0.7337 | likely_pathogenic | 0.7663 | pathogenic | -1.749 | Destabilizing | 0.991 | D | 0.794 | deleterious | None | None | None | None | N |
L/M | 0.2116 | likely_benign | 0.2209 | benign | -0.852 | Destabilizing | 0.998 | D | 0.741 | deleterious | D | 0.53774105 | None | None | N |
L/N | 0.9019 | likely_pathogenic | 0.9074 | pathogenic | -1.808 | Destabilizing | 0.991 | D | 0.835 | deleterious | None | None | None | None | N |
L/P | 0.9925 | likely_pathogenic | 0.9928 | pathogenic | -1.384 | Destabilizing | 0.995 | D | 0.847 | deleterious | None | None | None | None | N |
L/Q | 0.4874 | ambiguous | 0.5259 | ambiguous | -1.815 | Destabilizing | 0.995 | D | 0.839 | deleterious | None | None | None | None | N |
L/R | 0.5958 | likely_pathogenic | 0.6271 | pathogenic | -1.307 | Destabilizing | 0.991 | D | 0.817 | deleterious | None | None | None | None | N |
L/S | 0.6947 | likely_pathogenic | 0.7139 | pathogenic | -2.465 | Highly Destabilizing | 0.976 | D | 0.734 | prob.delet. | N | 0.49865525 | None | None | N |
L/T | 0.3764 | ambiguous | 0.4474 | ambiguous | -2.206 | Highly Destabilizing | 0.18 | N | 0.456 | neutral | None | None | None | None | N |
L/V | 0.1334 | likely_benign | 0.1453 | benign | -1.384 | Destabilizing | 0.919 | D | 0.609 | neutral | N | 0.511740122 | None | None | N |
L/W | 0.9008 | likely_pathogenic | 0.9021 | pathogenic | -1.651 | Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.538501519 | None | None | N |
L/Y | 0.9154 | likely_pathogenic | 0.9065 | pathogenic | -1.384 | Destabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.