Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26379 | 79360;79361;79362 | chr2:178566997;178566996;178566995 | chr2:179431724;179431723;179431722 |
N2AB | 24738 | 74437;74438;74439 | chr2:178566997;178566996;178566995 | chr2:179431724;179431723;179431722 |
N2A | 23811 | 71656;71657;71658 | chr2:178566997;178566996;178566995 | chr2:179431724;179431723;179431722 |
N2B | 17314 | 52165;52166;52167 | chr2:178566997;178566996;178566995 | chr2:179431724;179431723;179431722 |
Novex-1 | 17439 | 52540;52541;52542 | chr2:178566997;178566996;178566995 | chr2:179431724;179431723;179431722 |
Novex-2 | 17506 | 52741;52742;52743 | chr2:178566997;178566996;178566995 | chr2:179431724;179431723;179431722 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.8 | N | 0.635 | 0.413 | 0.772253545797 | gnomAD-4.0.0 | 1.36854E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99552E-07 | 0 | 1.65717E-05 |
L/V | rs1706131161 | None | 0.001 | N | 0.196 | 0.039 | 0.208816687407 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/V | rs1706131161 | None | 0.001 | N | 0.196 | 0.039 | 0.208816687407 | gnomAD-4.0.0 | 6.57713E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47054E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2085 | likely_benign | 0.2058 | benign | -1.253 | Destabilizing | 0.134 | N | 0.428 | neutral | None | None | None | None | N |
L/C | 0.3827 | ambiguous | 0.3953 | ambiguous | -0.706 | Destabilizing | 0.984 | D | 0.489 | neutral | None | None | None | None | N |
L/D | 0.7131 | likely_pathogenic | 0.7022 | pathogenic | -0.76 | Destabilizing | 0.942 | D | 0.693 | prob.delet. | None | None | None | None | N |
L/E | 0.3455 | ambiguous | 0.3424 | ambiguous | -0.805 | Destabilizing | 0.842 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/F | 0.1424 | likely_benign | 0.1322 | benign | -0.955 | Destabilizing | 0.724 | D | 0.44 | neutral | None | None | None | None | N |
L/G | 0.5685 | likely_pathogenic | 0.5367 | ambiguous | -1.512 | Destabilizing | 0.842 | D | 0.665 | prob.neutral | None | None | None | None | N |
L/H | 0.2225 | likely_benign | 0.218 | benign | -0.677 | Destabilizing | 0.984 | D | 0.667 | prob.neutral | None | None | None | None | N |
L/I | 0.0711 | likely_benign | 0.0749 | benign | -0.648 | Destabilizing | 0.001 | N | 0.22 | neutral | N | 0.412868702 | None | None | N |
L/K | 0.2164 | likely_benign | 0.2227 | benign | -0.828 | Destabilizing | 0.724 | D | 0.605 | neutral | None | None | None | None | N |
L/M | 0.09 | likely_benign | 0.0828 | benign | -0.488 | Destabilizing | 0.063 | N | 0.295 | neutral | None | None | None | None | N |
L/N | 0.3743 | ambiguous | 0.3692 | ambiguous | -0.598 | Destabilizing | 0.942 | D | 0.684 | prob.delet. | None | None | None | None | N |
L/P | 0.3665 | ambiguous | 0.3862 | ambiguous | -0.817 | Destabilizing | 0.924 | D | 0.693 | prob.delet. | N | 0.470719994 | None | None | N |
L/Q | 0.1328 | likely_benign | 0.1303 | benign | -0.825 | Destabilizing | 0.8 | D | 0.629 | neutral | N | 0.481733904 | None | None | N |
L/R | 0.1865 | likely_benign | 0.1872 | benign | -0.171 | Destabilizing | 0.8 | D | 0.635 | neutral | N | 0.481226925 | None | None | N |
L/S | 0.2772 | likely_benign | 0.2615 | benign | -1.121 | Destabilizing | 0.428 | N | 0.539 | neutral | None | None | None | None | N |
L/T | 0.1503 | likely_benign | 0.1543 | benign | -1.056 | Destabilizing | 0.428 | N | 0.465 | neutral | None | None | None | None | N |
L/V | 0.0681 | likely_benign | 0.0706 | benign | -0.817 | Destabilizing | 0.001 | N | 0.196 | neutral | N | 0.432550541 | None | None | N |
L/W | 0.2968 | likely_benign | 0.2789 | benign | -0.988 | Destabilizing | 0.984 | D | 0.658 | prob.neutral | None | None | None | None | N |
L/Y | 0.339 | likely_benign | 0.3248 | benign | -0.771 | Destabilizing | 0.842 | D | 0.514 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.