Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2637979360;79361;79362 chr2:178566997;178566996;178566995chr2:179431724;179431723;179431722
N2AB2473874437;74438;74439 chr2:178566997;178566996;178566995chr2:179431724;179431723;179431722
N2A2381171656;71657;71658 chr2:178566997;178566996;178566995chr2:179431724;179431723;179431722
N2B1731452165;52166;52167 chr2:178566997;178566996;178566995chr2:179431724;179431723;179431722
Novex-11743952540;52541;52542 chr2:178566997;178566996;178566995chr2:179431724;179431723;179431722
Novex-21750652741;52742;52743 chr2:178566997;178566996;178566995chr2:179431724;179431723;179431722
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Fn3-79
  • Domain position: 94
  • Structural Position: 129
  • Q(SASA): 0.3622
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/R None None 0.8 N 0.635 0.413 0.772253545797 gnomAD-4.0.0 1.36854E-06 None None None None N None 0 0 None 0 0 None 0 0 8.99552E-07 0 1.65717E-05
L/V rs1706131161 None 0.001 N 0.196 0.039 0.208816687407 gnomAD-3.1.2 6.58E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/V rs1706131161 None 0.001 N 0.196 0.039 0.208816687407 gnomAD-4.0.0 6.57713E-06 None None None None N None 0 0 None 0 0 None 0 0 1.47054E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2085 likely_benign 0.2058 benign -1.253 Destabilizing 0.134 N 0.428 neutral None None None None N
L/C 0.3827 ambiguous 0.3953 ambiguous -0.706 Destabilizing 0.984 D 0.489 neutral None None None None N
L/D 0.7131 likely_pathogenic 0.7022 pathogenic -0.76 Destabilizing 0.942 D 0.693 prob.delet. None None None None N
L/E 0.3455 ambiguous 0.3424 ambiguous -0.805 Destabilizing 0.842 D 0.677 prob.neutral None None None None N
L/F 0.1424 likely_benign 0.1322 benign -0.955 Destabilizing 0.724 D 0.44 neutral None None None None N
L/G 0.5685 likely_pathogenic 0.5367 ambiguous -1.512 Destabilizing 0.842 D 0.665 prob.neutral None None None None N
L/H 0.2225 likely_benign 0.218 benign -0.677 Destabilizing 0.984 D 0.667 prob.neutral None None None None N
L/I 0.0711 likely_benign 0.0749 benign -0.648 Destabilizing 0.001 N 0.22 neutral N 0.412868702 None None N
L/K 0.2164 likely_benign 0.2227 benign -0.828 Destabilizing 0.724 D 0.605 neutral None None None None N
L/M 0.09 likely_benign 0.0828 benign -0.488 Destabilizing 0.063 N 0.295 neutral None None None None N
L/N 0.3743 ambiguous 0.3692 ambiguous -0.598 Destabilizing 0.942 D 0.684 prob.delet. None None None None N
L/P 0.3665 ambiguous 0.3862 ambiguous -0.817 Destabilizing 0.924 D 0.693 prob.delet. N 0.470719994 None None N
L/Q 0.1328 likely_benign 0.1303 benign -0.825 Destabilizing 0.8 D 0.629 neutral N 0.481733904 None None N
L/R 0.1865 likely_benign 0.1872 benign -0.171 Destabilizing 0.8 D 0.635 neutral N 0.481226925 None None N
L/S 0.2772 likely_benign 0.2615 benign -1.121 Destabilizing 0.428 N 0.539 neutral None None None None N
L/T 0.1503 likely_benign 0.1543 benign -1.056 Destabilizing 0.428 N 0.465 neutral None None None None N
L/V 0.0681 likely_benign 0.0706 benign -0.817 Destabilizing 0.001 N 0.196 neutral N 0.432550541 None None N
L/W 0.2968 likely_benign 0.2789 benign -0.988 Destabilizing 0.984 D 0.658 prob.neutral None None None None N
L/Y 0.339 likely_benign 0.3248 benign -0.771 Destabilizing 0.842 D 0.514 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.