Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2638679381;79382;79383 chr2:178566976;178566975;178566974chr2:179431703;179431702;179431701
N2AB2474574458;74459;74460 chr2:178566976;178566975;178566974chr2:179431703;179431702;179431701
N2A2381871677;71678;71679 chr2:178566976;178566975;178566974chr2:179431703;179431702;179431701
N2B1732152186;52187;52188 chr2:178566976;178566975;178566974chr2:179431703;179431702;179431701
Novex-11744652561;52562;52563 chr2:178566976;178566975;178566974chr2:179431703;179431702;179431701
Novex-21751352762;52763;52764 chr2:178566976;178566975;178566974chr2:179431703;179431702;179431701
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-80
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.7033
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1706115983 None 0.087 N 0.255 0.068 0.257292322809 gnomAD-4.0.0 1.20032E-06 None None None None I None 0 0 None 0 0 None 0 0 1.3125E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1224 likely_benign 0.1302 benign -0.655 Destabilizing None N 0.097 neutral None None None None I
L/C 0.2842 likely_benign 0.2933 benign -0.621 Destabilizing 0.439 N 0.479 neutral None None None None I
L/D 0.6243 likely_pathogenic 0.6343 pathogenic -0.06 Destabilizing 0.035 N 0.531 neutral None None None None I
L/E 0.2925 likely_benign 0.3018 benign -0.16 Destabilizing 0.035 N 0.566 neutral None None None None I
L/F 0.171 likely_benign 0.1691 benign -0.711 Destabilizing 0.087 N 0.255 neutral N 0.484211513 None None I
L/G 0.3724 ambiguous 0.3769 ambiguous -0.809 Destabilizing 0.007 N 0.583 neutral None None None None I
L/H 0.1707 likely_benign 0.175 benign -0.09 Destabilizing 0.371 N 0.431 neutral N 0.479883128 None None I
L/I 0.0842 likely_benign 0.0825 benign -0.38 Destabilizing 0.006 N 0.261 neutral N 0.430627744 None None I
L/K 0.1456 likely_benign 0.166 benign -0.232 Destabilizing 0.035 N 0.553 neutral None None None None I
L/M 0.1049 likely_benign 0.1086 benign -0.333 Destabilizing 0.204 N 0.332 neutral None None None None I
L/N 0.2797 likely_benign 0.2943 benign -0.033 Destabilizing 0.112 N 0.519 neutral None None None None I
L/P 0.0704 likely_benign 0.0732 benign -0.438 Destabilizing None N 0.128 neutral N 0.336370788 None None I
L/Q 0.0997 likely_benign 0.1079 benign -0.293 Destabilizing 0.204 N 0.523 neutral None None None None I
L/R 0.109 likely_benign 0.1218 benign 0.329 Stabilizing 0.087 N 0.509 neutral N 0.450733657 None None I
L/S 0.1688 likely_benign 0.1787 benign -0.523 Destabilizing 0.007 N 0.463 neutral None None None None I
L/T 0.1109 likely_benign 0.1192 benign -0.515 Destabilizing None N 0.141 neutral None None None None I
L/V 0.0662 likely_benign 0.0652 benign -0.438 Destabilizing None N 0.076 neutral N 0.364015963 None None I
L/W 0.3266 likely_benign 0.3146 benign -0.689 Destabilizing 0.747 D 0.503 neutral None None None None I
L/Y 0.3278 likely_benign 0.3261 benign -0.428 Destabilizing 0.204 N 0.468 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.