Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26389 | 79390;79391;79392 | chr2:178566967;178566966;178566965 | chr2:179431694;179431693;179431692 |
N2AB | 24748 | 74467;74468;74469 | chr2:178566967;178566966;178566965 | chr2:179431694;179431693;179431692 |
N2A | 23821 | 71686;71687;71688 | chr2:178566967;178566966;178566965 | chr2:179431694;179431693;179431692 |
N2B | 17324 | 52195;52196;52197 | chr2:178566967;178566966;178566965 | chr2:179431694;179431693;179431692 |
Novex-1 | 17449 | 52570;52571;52572 | chr2:178566967;178566966;178566965 | chr2:179431694;179431693;179431692 |
Novex-2 | 17516 | 52771;52772;52773 | chr2:178566967;178566966;178566965 | chr2:179431694;179431693;179431692 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs760307077 | -0.72 | 0.967 | N | 0.745 | 0.496 | 0.651006993216 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
P/L | rs760307077 | -0.72 | 0.967 | N | 0.745 | 0.496 | 0.651006993216 | gnomAD-4.0.0 | 3.18323E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86566E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0596 | likely_benign | 0.0638 | benign | -1.583 | Destabilizing | 0.805 | D | 0.689 | prob.neutral | N | 0.463700167 | None | None | N |
P/C | 0.3386 | likely_benign | 0.3452 | ambiguous | -1.305 | Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | N |
P/D | 0.7114 | likely_pathogenic | 0.7334 | pathogenic | -2.286 | Highly Destabilizing | 0.975 | D | 0.694 | prob.neutral | None | None | None | None | N |
P/E | 0.333 | likely_benign | 0.3584 | ambiguous | -2.286 | Highly Destabilizing | 0.916 | D | 0.701 | prob.neutral | None | None | None | None | N |
P/F | 0.4553 | ambiguous | 0.4402 | ambiguous | -1.298 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
P/G | 0.3421 | ambiguous | 0.3659 | ambiguous | -1.884 | Destabilizing | 0.916 | D | 0.739 | prob.delet. | None | None | None | None | N |
P/H | 0.2486 | likely_benign | 0.2665 | benign | -1.418 | Destabilizing | 0.997 | D | 0.759 | deleterious | None | None | None | None | N |
P/I | 0.2932 | likely_benign | 0.2908 | benign | -0.839 | Destabilizing | 0.987 | D | 0.788 | deleterious | None | None | None | None | N |
P/K | 0.3102 | likely_benign | 0.3178 | benign | -1.299 | Destabilizing | 0.845 | D | 0.696 | prob.neutral | None | None | None | None | N |
P/L | 0.1581 | likely_benign | 0.1604 | benign | -0.839 | Destabilizing | 0.967 | D | 0.745 | deleterious | N | 0.516570651 | None | None | N |
P/M | 0.2697 | likely_benign | 0.2629 | benign | -0.734 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
P/N | 0.4525 | ambiguous | 0.4733 | ambiguous | -1.223 | Destabilizing | 0.975 | D | 0.735 | prob.delet. | None | None | None | None | N |
P/Q | 0.1512 | likely_benign | 0.1578 | benign | -1.461 | Destabilizing | 0.967 | D | 0.689 | prob.neutral | N | 0.51183371 | None | None | N |
P/R | 0.2057 | likely_benign | 0.2157 | benign | -0.773 | Destabilizing | 0.056 | N | 0.633 | neutral | N | 0.496211444 | None | None | N |
P/S | 0.1214 | likely_benign | 0.1369 | benign | -1.633 | Destabilizing | 0.426 | N | 0.507 | neutral | N | 0.473725869 | None | None | N |
P/T | 0.1344 | likely_benign | 0.1542 | benign | -1.537 | Destabilizing | 0.805 | D | 0.71 | prob.delet. | N | 0.501744852 | None | None | N |
P/V | 0.1928 | likely_benign | 0.2003 | benign | -1.056 | Destabilizing | 0.987 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/W | 0.7121 | likely_pathogenic | 0.7111 | pathogenic | -1.507 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | N |
P/Y | 0.5181 | ambiguous | 0.5079 | ambiguous | -1.211 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.