Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26392 | 79399;79400;79401 | chr2:178566958;178566957;178566956 | chr2:179431685;179431684;179431683 |
N2AB | 24751 | 74476;74477;74478 | chr2:178566958;178566957;178566956 | chr2:179431685;179431684;179431683 |
N2A | 23824 | 71695;71696;71697 | chr2:178566958;178566957;178566956 | chr2:179431685;179431684;179431683 |
N2B | 17327 | 52204;52205;52206 | chr2:178566958;178566957;178566956 | chr2:179431685;179431684;179431683 |
Novex-1 | 17452 | 52579;52580;52581 | chr2:178566958;178566957;178566956 | chr2:179431685;179431684;179431683 |
Novex-2 | 17519 | 52780;52781;52782 | chr2:178566958;178566957;178566956 | chr2:179431685;179431684;179431683 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.042 | N | 0.269 | 0.035 | 0.0401082797425 | gnomAD-4.0.0 | 6.84271E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99546E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0667 | likely_benign | 0.0664 | benign | -0.269 | Destabilizing | None | N | 0.073 | neutral | None | None | None | None | N |
S/C | 0.096 | likely_benign | 0.0831 | benign | -0.297 | Destabilizing | 0.822 | D | 0.357 | neutral | N | 0.492103064 | None | None | N |
S/D | 0.2291 | likely_benign | 0.1865 | benign | 0.08 | Stabilizing | None | N | 0.109 | neutral | None | None | None | None | N |
S/E | 0.3279 | likely_benign | 0.3009 | benign | -0.009 | Destabilizing | 0.001 | N | 0.075 | neutral | None | None | None | None | N |
S/F | 0.1438 | likely_benign | 0.1545 | benign | -0.79 | Destabilizing | 0.667 | D | 0.435 | neutral | None | None | None | None | N |
S/G | 0.07 | likely_benign | 0.0657 | benign | -0.394 | Destabilizing | 0.019 | N | 0.244 | neutral | N | 0.44973358 | None | None | N |
S/H | 0.2525 | likely_benign | 0.2025 | benign | -0.824 | Destabilizing | 0.497 | N | 0.379 | neutral | None | None | None | None | N |
S/I | 0.1445 | likely_benign | 0.1268 | benign | -0.075 | Destabilizing | 0.175 | N | 0.471 | neutral | N | 0.486753172 | None | None | N |
S/K | 0.5335 | ambiguous | 0.4618 | ambiguous | -0.538 | Destabilizing | 0.055 | N | 0.244 | neutral | None | None | None | None | N |
S/L | 0.0895 | likely_benign | 0.0941 | benign | -0.075 | Destabilizing | 0.104 | N | 0.401 | neutral | None | None | None | None | N |
S/M | 0.139 | likely_benign | 0.1247 | benign | 0.052 | Stabilizing | 0.859 | D | 0.375 | neutral | None | None | None | None | N |
S/N | 0.0814 | likely_benign | 0.0649 | benign | -0.255 | Destabilizing | None | N | 0.125 | neutral | N | 0.41477007 | None | None | N |
S/P | 0.2782 | likely_benign | 0.311 | benign | -0.11 | Destabilizing | None | N | 0.173 | neutral | None | None | None | None | N |
S/Q | 0.326 | likely_benign | 0.2773 | benign | -0.493 | Destabilizing | 0.22 | N | 0.261 | neutral | None | None | None | None | N |
S/R | 0.4986 | ambiguous | 0.4455 | ambiguous | -0.286 | Destabilizing | 0.175 | N | 0.394 | neutral | N | 0.462433518 | None | None | N |
S/T | 0.078 | likely_benign | 0.0754 | benign | -0.348 | Destabilizing | 0.042 | N | 0.269 | neutral | N | 0.437633861 | None | None | N |
S/V | 0.1338 | likely_benign | 0.1228 | benign | -0.11 | Destabilizing | 0.055 | N | 0.4 | neutral | None | None | None | None | N |
S/W | 0.3133 | likely_benign | 0.3309 | benign | -0.82 | Destabilizing | 0.958 | D | 0.457 | neutral | None | None | None | None | N |
S/Y | 0.1354 | likely_benign | 0.1337 | benign | -0.54 | Destabilizing | 0.859 | D | 0.435 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.