Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26393 | 79402;79403;79404 | chr2:178566955;178566954;178566953 | chr2:179431682;179431681;179431680 |
N2AB | 24752 | 74479;74480;74481 | chr2:178566955;178566954;178566953 | chr2:179431682;179431681;179431680 |
N2A | 23825 | 71698;71699;71700 | chr2:178566955;178566954;178566953 | chr2:179431682;179431681;179431680 |
N2B | 17328 | 52207;52208;52209 | chr2:178566955;178566954;178566953 | chr2:179431682;179431681;179431680 |
Novex-1 | 17453 | 52582;52583;52584 | chr2:178566955;178566954;178566953 | chr2:179431682;179431681;179431680 |
Novex-2 | 17520 | 52783;52784;52785 | chr2:178566955;178566954;178566953 | chr2:179431682;179431681;179431680 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.901 | N | 0.711 | 0.252 | 0.446310458034 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/S | rs745768515 | -3.001 | 0.901 | N | 0.772 | 0.443 | 0.543076009278 | gnomAD-4.0.0 | 2.7371E-06 | None | None | None | None | N | None | 5.978E-05 | 0 | None | 0 | 0 | None | 0 | 1.73491E-04 | 0 | 0 | 1.657E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3873 | ambiguous | 0.3546 | ambiguous | -2.27 | Highly Destabilizing | 0.633 | D | 0.662 | neutral | None | None | None | None | N |
L/C | 0.6554 | likely_pathogenic | 0.6223 | pathogenic | -1.8 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/D | 0.9769 | likely_pathogenic | 0.9793 | pathogenic | -2.624 | Highly Destabilizing | 0.961 | D | 0.822 | deleterious | None | None | None | None | N |
L/E | 0.8791 | likely_pathogenic | 0.8879 | pathogenic | -2.497 | Highly Destabilizing | 0.923 | D | 0.816 | deleterious | None | None | None | None | N |
L/F | 0.5373 | ambiguous | 0.4941 | ambiguous | -1.449 | Destabilizing | 0.901 | D | 0.711 | prob.delet. | N | 0.484701597 | None | None | N |
L/G | 0.8543 | likely_pathogenic | 0.8449 | pathogenic | -2.717 | Highly Destabilizing | 0.923 | D | 0.798 | deleterious | None | None | None | None | N |
L/H | 0.8549 | likely_pathogenic | 0.8607 | pathogenic | -2.145 | Highly Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
L/I | 0.1009 | likely_benign | 0.0814 | benign | -1.024 | Destabilizing | 0.372 | N | 0.691 | prob.neutral | None | None | None | None | N |
L/K | 0.8775 | likely_pathogenic | 0.9003 | pathogenic | -1.662 | Destabilizing | 0.923 | D | 0.785 | deleterious | None | None | None | None | N |
L/M | 0.1944 | likely_benign | 0.1724 | benign | -1.075 | Destabilizing | 0.901 | D | 0.672 | neutral | N | 0.515176116 | None | None | N |
L/N | 0.8832 | likely_pathogenic | 0.874 | pathogenic | -1.794 | Destabilizing | 0.961 | D | 0.827 | deleterious | None | None | None | None | N |
L/P | 0.2018 | likely_benign | 0.2488 | benign | -1.416 | Destabilizing | 0.011 | N | 0.499 | neutral | None | None | None | None | N |
L/Q | 0.688 | likely_pathogenic | 0.7027 | pathogenic | -1.825 | Destabilizing | 0.961 | D | 0.796 | deleterious | None | None | None | None | N |
L/R | 0.8129 | likely_pathogenic | 0.8456 | pathogenic | -1.269 | Destabilizing | 0.961 | D | 0.801 | deleterious | None | None | None | None | N |
L/S | 0.7436 | likely_pathogenic | 0.7084 | pathogenic | -2.423 | Highly Destabilizing | 0.901 | D | 0.772 | deleterious | N | 0.515683095 | None | None | N |
L/T | 0.3696 | ambiguous | 0.3333 | benign | -2.169 | Highly Destabilizing | 0.775 | D | 0.767 | deleterious | None | None | None | None | N |
L/V | 0.0768 | likely_benign | 0.0678 | benign | -1.416 | Destabilizing | 0.008 | N | 0.475 | neutral | N | 0.449125865 | None | None | N |
L/W | 0.8295 | likely_pathogenic | 0.8402 | pathogenic | -1.745 | Destabilizing | 0.995 | D | 0.786 | deleterious | D | 0.527546379 | None | None | N |
L/Y | 0.8927 | likely_pathogenic | 0.8911 | pathogenic | -1.472 | Destabilizing | 0.961 | D | 0.74 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.