Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26394 | 79405;79406;79407 | chr2:178566952;178566951;178566950 | chr2:179431679;179431678;179431677 |
N2AB | 24753 | 74482;74483;74484 | chr2:178566952;178566951;178566950 | chr2:179431679;179431678;179431677 |
N2A | 23826 | 71701;71702;71703 | chr2:178566952;178566951;178566950 | chr2:179431679;179431678;179431677 |
N2B | 17329 | 52210;52211;52212 | chr2:178566952;178566951;178566950 | chr2:179431679;179431678;179431677 |
Novex-1 | 17454 | 52585;52586;52587 | chr2:178566952;178566951;178566950 | chr2:179431679;179431678;179431677 |
Novex-2 | 17521 | 52786;52787;52788 | chr2:178566952;178566951;178566950 | chr2:179431679;179431678;179431677 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs144788732 | -0.139 | 1.0 | N | 0.659 | 0.199 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93424E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs144788732 | -0.139 | 1.0 | N | 0.659 | 0.199 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
E/Q | rs144788732 | -0.139 | 1.0 | N | 0.659 | 0.199 | None | gnomAD-4.0.0 | 1.02504E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.94156E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3101 | likely_benign | 0.3614 | ambiguous | -0.498 | Destabilizing | 0.999 | D | 0.745 | deleterious | N | 0.475394483 | None | None | I |
E/C | 0.904 | likely_pathogenic | 0.9198 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
E/D | 0.212 | likely_benign | 0.2239 | benign | -0.492 | Destabilizing | 0.999 | D | 0.512 | neutral | N | 0.484370931 | None | None | I |
E/F | 0.8767 | likely_pathogenic | 0.8974 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
E/G | 0.5303 | ambiguous | 0.567 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.500513403 | None | None | I |
E/H | 0.6414 | likely_pathogenic | 0.7195 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/I | 0.483 | ambiguous | 0.5331 | ambiguous | 0.123 | Stabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
E/K | 0.4366 | ambiguous | 0.5314 | ambiguous | 0.219 | Stabilizing | 0.999 | D | 0.633 | neutral | N | 0.486635742 | None | None | I |
E/L | 0.5775 | likely_pathogenic | 0.6359 | pathogenic | 0.123 | Stabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
E/M | 0.6097 | likely_pathogenic | 0.6508 | pathogenic | 0.31 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
E/N | 0.5035 | ambiguous | 0.5445 | ambiguous | -0.187 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
E/P | 0.9718 | likely_pathogenic | 0.9794 | pathogenic | -0.063 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
E/Q | 0.2214 | likely_benign | 0.2717 | benign | -0.122 | Destabilizing | 1.0 | D | 0.659 | neutral | N | 0.517036007 | None | None | I |
E/R | 0.5594 | ambiguous | 0.6471 | pathogenic | 0.42 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
E/S | 0.3916 | ambiguous | 0.4344 | ambiguous | -0.355 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/T | 0.3206 | likely_benign | 0.3767 | ambiguous | -0.153 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
E/V | 0.2771 | likely_benign | 0.3269 | benign | -0.063 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.497604884 | None | None | I |
E/W | 0.9589 | likely_pathogenic | 0.9687 | pathogenic | -0.069 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
E/Y | 0.8168 | likely_pathogenic | 0.8441 | pathogenic | -0.008 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.