Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26398 | 79417;79418;79419 | chr2:178566940;178566939;178566938 | chr2:179431667;179431666;179431665 |
N2AB | 24757 | 74494;74495;74496 | chr2:178566940;178566939;178566938 | chr2:179431667;179431666;179431665 |
N2A | 23830 | 71713;71714;71715 | chr2:178566940;178566939;178566938 | chr2:179431667;179431666;179431665 |
N2B | 17333 | 52222;52223;52224 | chr2:178566940;178566939;178566938 | chr2:179431667;179431666;179431665 |
Novex-1 | 17458 | 52597;52598;52599 | chr2:178566940;178566939;178566938 | chr2:179431667;179431666;179431665 |
Novex-2 | 17525 | 52798;52799;52800 | chr2:178566940;178566939;178566938 | chr2:179431667;179431666;179431665 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs749071678 | -1.494 | 0.892 | N | 0.586 | 0.363 | 0.615014731015 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
I/T | rs749071678 | -1.494 | 0.892 | N | 0.586 | 0.363 | 0.615014731015 | gnomAD-4.0.0 | 6.84272E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4524 | ambiguous | 0.3463 | ambiguous | -1.858 | Destabilizing | 0.845 | D | 0.476 | neutral | None | None | None | None | N |
I/C | 0.8249 | likely_pathogenic | 0.7902 | pathogenic | -1.506 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
I/D | 0.9701 | likely_pathogenic | 0.9536 | pathogenic | -1.562 | Destabilizing | 0.996 | D | 0.758 | deleterious | None | None | None | None | N |
I/E | 0.9141 | likely_pathogenic | 0.8733 | pathogenic | -1.554 | Destabilizing | 0.987 | D | 0.761 | deleterious | None | None | None | None | N |
I/F | 0.4526 | ambiguous | 0.3909 | ambiguous | -1.636 | Destabilizing | 0.967 | D | 0.573 | neutral | N | 0.490744168 | None | None | N |
I/G | 0.9086 | likely_pathogenic | 0.8551 | pathogenic | -2.18 | Highly Destabilizing | 0.987 | D | 0.758 | deleterious | None | None | None | None | N |
I/H | 0.8811 | likely_pathogenic | 0.8346 | pathogenic | -1.502 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
I/K | 0.7416 | likely_pathogenic | 0.694 | pathogenic | -1.171 | Destabilizing | 0.987 | D | 0.755 | deleterious | None | None | None | None | N |
I/L | 0.2812 | likely_benign | 0.2468 | benign | -1.033 | Destabilizing | 0.426 | N | 0.268 | neutral | N | 0.521521894 | None | None | N |
I/M | 0.2053 | likely_benign | 0.1723 | benign | -0.856 | Destabilizing | 0.983 | D | 0.561 | neutral | N | 0.493604551 | None | None | N |
I/N | 0.7912 | likely_pathogenic | 0.7243 | pathogenic | -1.065 | Destabilizing | 0.994 | D | 0.755 | deleterious | N | 0.497617022 | None | None | N |
I/P | 0.8325 | likely_pathogenic | 0.8061 | pathogenic | -1.279 | Destabilizing | 0.996 | D | 0.769 | deleterious | None | None | None | None | N |
I/Q | 0.817 | likely_pathogenic | 0.7586 | pathogenic | -1.284 | Destabilizing | 0.996 | D | 0.749 | deleterious | None | None | None | None | N |
I/R | 0.6331 | likely_pathogenic | 0.58 | pathogenic | -0.62 | Destabilizing | 0.987 | D | 0.755 | deleterious | None | None | None | None | N |
I/S | 0.6148 | likely_pathogenic | 0.5266 | ambiguous | -1.717 | Destabilizing | 0.983 | D | 0.698 | prob.neutral | N | 0.497242312 | None | None | N |
I/T | 0.2122 | likely_benign | 0.1702 | benign | -1.586 | Destabilizing | 0.892 | D | 0.586 | neutral | N | 0.510824898 | None | None | N |
I/V | 0.0768 | likely_benign | 0.0668 | benign | -1.279 | Destabilizing | 0.011 | N | 0.158 | neutral | N | 0.412255414 | None | None | N |
I/W | 0.9475 | likely_pathogenic | 0.9369 | pathogenic | -1.702 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/Y | 0.8608 | likely_pathogenic | 0.8299 | pathogenic | -1.429 | Destabilizing | 0.987 | D | 0.67 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.