Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26399 | 79420;79421;79422 | chr2:178566937;178566936;178566935 | chr2:179431664;179431663;179431662 |
N2AB | 24758 | 74497;74498;74499 | chr2:178566937;178566936;178566935 | chr2:179431664;179431663;179431662 |
N2A | 23831 | 71716;71717;71718 | chr2:178566937;178566936;178566935 | chr2:179431664;179431663;179431662 |
N2B | 17334 | 52225;52226;52227 | chr2:178566937;178566936;178566935 | chr2:179431664;179431663;179431662 |
Novex-1 | 17459 | 52600;52601;52602 | chr2:178566937;178566936;178566935 | chr2:179431664;179431663;179431662 |
Novex-2 | 17526 | 52801;52802;52803 | chr2:178566937;178566936;178566935 | chr2:179431664;179431663;179431662 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.379 | N | 0.293 | 0.301 | 0.247322355667 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4393 | ambiguous | 0.3927 | ambiguous | -0.991 | Destabilizing | 0.992 | D | 0.361 | neutral | None | None | None | None | N |
A/D | 0.767 | likely_pathogenic | 0.7386 | pathogenic | -2.014 | Highly Destabilizing | 0.549 | D | 0.401 | neutral | N | 0.417354589 | None | None | N |
A/E | 0.7168 | likely_pathogenic | 0.6865 | pathogenic | -2.086 | Highly Destabilizing | 0.617 | D | 0.383 | neutral | None | None | None | None | N |
A/F | 0.5999 | likely_pathogenic | 0.5518 | ambiguous | -1.388 | Destabilizing | 0.92 | D | 0.435 | neutral | None | None | None | None | N |
A/G | 0.1777 | likely_benign | 0.156 | benign | -1.24 | Destabilizing | 0.002 | N | 0.073 | neutral | N | 0.417698519 | None | None | N |
A/H | 0.707 | likely_pathogenic | 0.7165 | pathogenic | -1.384 | Destabilizing | 0.972 | D | 0.407 | neutral | None | None | None | None | N |
A/I | 0.5235 | ambiguous | 0.4467 | ambiguous | -0.645 | Destabilizing | 0.447 | N | 0.429 | neutral | None | None | None | None | N |
A/K | 0.8314 | likely_pathogenic | 0.8177 | pathogenic | -1.333 | Destabilizing | 0.617 | D | 0.391 | neutral | None | None | None | None | N |
A/L | 0.2754 | likely_benign | 0.2484 | benign | -0.645 | Destabilizing | 0.447 | N | 0.373 | neutral | None | None | None | None | N |
A/M | 0.2991 | likely_benign | 0.2461 | benign | -0.328 | Destabilizing | 0.92 | D | 0.383 | neutral | None | None | None | None | N |
A/N | 0.4038 | ambiguous | 0.384 | ambiguous | -1.088 | Destabilizing | 0.617 | D | 0.393 | neutral | None | None | None | None | N |
A/P | 0.9238 | likely_pathogenic | 0.9015 | pathogenic | -0.74 | Destabilizing | 0.712 | D | 0.427 | neutral | N | 0.497586242 | None | None | N |
A/Q | 0.5563 | ambiguous | 0.5473 | ambiguous | -1.372 | Destabilizing | 0.85 | D | 0.394 | neutral | None | None | None | None | N |
A/R | 0.7565 | likely_pathogenic | 0.7426 | pathogenic | -0.841 | Destabilizing | 0.85 | D | 0.42 | neutral | None | None | None | None | N |
A/S | 0.0981 | likely_benign | 0.0939 | benign | -1.294 | Destabilizing | 0.007 | N | 0.064 | neutral | N | 0.385663458 | None | None | N |
A/T | 0.0846 | likely_benign | 0.0763 | benign | -1.299 | Destabilizing | 0.001 | N | 0.059 | neutral | N | 0.308856113 | None | None | N |
A/V | 0.2589 | likely_benign | 0.2099 | benign | -0.74 | Destabilizing | 0.379 | N | 0.293 | neutral | N | 0.447042778 | None | None | N |
A/W | 0.9227 | likely_pathogenic | 0.9093 | pathogenic | -1.686 | Destabilizing | 0.992 | D | 0.473 | neutral | None | None | None | None | N |
A/Y | 0.7474 | likely_pathogenic | 0.7165 | pathogenic | -1.327 | Destabilizing | 0.972 | D | 0.429 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.