Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2640 | 8143;8144;8145 | chr2:178771409;178771408;178771407 | chr2:179636136;179636135;179636134 |
N2AB | 2640 | 8143;8144;8145 | chr2:178771409;178771408;178771407 | chr2:179636136;179636135;179636134 |
N2A | 2640 | 8143;8144;8145 | chr2:178771409;178771408;178771407 | chr2:179636136;179636135;179636134 |
N2B | 2594 | 8005;8006;8007 | chr2:178771409;178771408;178771407 | chr2:179636136;179636135;179636134 |
Novex-1 | 2594 | 8005;8006;8007 | chr2:178771409;178771408;178771407 | chr2:179636136;179636135;179636134 |
Novex-2 | 2594 | 8005;8006;8007 | chr2:178771409;178771408;178771407 | chr2:179636136;179636135;179636134 |
Novex-3 | 2640 | 8143;8144;8145 | chr2:178771409;178771408;178771407 | chr2:179636136;179636135;179636134 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1343185312 | -1.134 | 1.0 | D | 0.731 | 0.646 | 0.609393688558 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
E/G | rs1343185312 | -1.134 | 1.0 | D | 0.731 | 0.646 | 0.609393688558 | gnomAD-4.0.0 | 2.05242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69814E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2114 | likely_benign | 0.215 | benign | -0.933 | Destabilizing | 0.999 | D | 0.674 | neutral | D | 0.660259061 | None | None | N |
E/C | 0.8699 | likely_pathogenic | 0.862 | pathogenic | -0.659 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
E/D | 0.3525 | ambiguous | 0.375 | ambiguous | -1.361 | Destabilizing | 0.999 | D | 0.471 | neutral | D | 0.566730592 | None | None | N |
E/F | 0.7796 | likely_pathogenic | 0.7753 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/G | 0.3593 | ambiguous | 0.3554 | ambiguous | -1.295 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | D | 0.624274278 | None | None | N |
E/H | 0.597 | likely_pathogenic | 0.5741 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
E/I | 0.3004 | likely_benign | 0.3018 | benign | 0.057 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/K | 0.3317 | likely_benign | 0.298 | benign | -1.042 | Destabilizing | 0.999 | D | 0.569 | neutral | N | 0.501827228 | None | None | N |
E/L | 0.4757 | ambiguous | 0.459 | ambiguous | 0.057 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/M | 0.5117 | ambiguous | 0.5025 | ambiguous | 0.522 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/N | 0.5144 | ambiguous | 0.5301 | ambiguous | -1.362 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/P | 0.9806 | likely_pathogenic | 0.9728 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/Q | 0.1822 | likely_benign | 0.1744 | benign | -1.233 | Destabilizing | 1.0 | D | 0.601 | neutral | N | 0.512123715 | None | None | N |
E/R | 0.4728 | ambiguous | 0.4321 | ambiguous | -0.797 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/S | 0.247 | likely_benign | 0.2623 | benign | -1.72 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
E/T | 0.2204 | likely_benign | 0.2297 | benign | -1.429 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/V | 0.1965 | likely_benign | 0.1957 | benign | -0.253 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.57436629 | None | None | N |
E/W | 0.9293 | likely_pathogenic | 0.92 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/Y | 0.7279 | likely_pathogenic | 0.7121 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.