Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26416 | 79471;79472;79473 | chr2:178566886;178566885;178566884 | chr2:179431613;179431612;179431611 |
N2AB | 24775 | 74548;74549;74550 | chr2:178566886;178566885;178566884 | chr2:179431613;179431612;179431611 |
N2A | 23848 | 71767;71768;71769 | chr2:178566886;178566885;178566884 | chr2:179431613;179431612;179431611 |
N2B | 17351 | 52276;52277;52278 | chr2:178566886;178566885;178566884 | chr2:179431613;179431612;179431611 |
Novex-1 | 17476 | 52651;52652;52653 | chr2:178566886;178566885;178566884 | chr2:179431613;179431612;179431611 |
Novex-2 | 17543 | 52852;52853;52854 | chr2:178566886;178566885;178566884 | chr2:179431613;179431612;179431611 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.89 | N | 0.599 | 0.423 | 0.299770980665 | gnomAD-4.0.0 | 1.59176E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02554E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1632 | likely_benign | 0.1827 | benign | -0.49 | Destabilizing | 0.559 | D | 0.655 | neutral | None | None | None | None | I |
S/C | 0.1352 | likely_benign | 0.1633 | benign | -0.255 | Destabilizing | 0.997 | D | 0.61 | neutral | N | 0.492123293 | None | None | I |
S/D | 0.9024 | likely_pathogenic | 0.9117 | pathogenic | -0.249 | Destabilizing | 0.754 | D | 0.637 | neutral | None | None | None | None | I |
S/E | 0.9391 | likely_pathogenic | 0.9399 | pathogenic | -0.321 | Destabilizing | 0.754 | D | 0.639 | neutral | None | None | None | None | I |
S/F | 0.7784 | likely_pathogenic | 0.8126 | pathogenic | -0.95 | Destabilizing | 0.993 | D | 0.665 | neutral | None | None | None | None | I |
S/G | 0.2584 | likely_benign | 0.2874 | benign | -0.653 | Destabilizing | 0.822 | D | 0.621 | neutral | N | 0.46785593 | None | None | I |
S/H | 0.768 | likely_pathogenic | 0.7795 | pathogenic | -1.226 | Destabilizing | 0.978 | D | 0.588 | neutral | None | None | None | None | I |
S/I | 0.7616 | likely_pathogenic | 0.7692 | pathogenic | -0.181 | Destabilizing | 0.97 | D | 0.669 | neutral | N | 0.513074704 | None | None | I |
S/K | 0.9717 | likely_pathogenic | 0.9722 | pathogenic | -0.63 | Destabilizing | 0.019 | N | 0.435 | neutral | None | None | None | None | I |
S/L | 0.3807 | ambiguous | 0.4308 | ambiguous | -0.181 | Destabilizing | 0.86 | D | 0.662 | neutral | None | None | None | None | I |
S/M | 0.5269 | ambiguous | 0.5341 | ambiguous | 0.254 | Stabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
S/N | 0.2942 | likely_benign | 0.2988 | benign | -0.388 | Destabilizing | 0.058 | N | 0.453 | neutral | N | 0.484766233 | None | None | I |
S/P | 0.9921 | likely_pathogenic | 0.9913 | pathogenic | -0.253 | Destabilizing | 0.978 | D | 0.609 | neutral | None | None | None | None | I |
S/Q | 0.86 | likely_pathogenic | 0.8661 | pathogenic | -0.68 | Destabilizing | 0.956 | D | 0.65 | neutral | None | None | None | None | I |
S/R | 0.945 | likely_pathogenic | 0.9472 | pathogenic | -0.397 | Destabilizing | 0.89 | D | 0.599 | neutral | N | 0.49162586 | None | None | I |
S/T | 0.279 | likely_benign | 0.2572 | benign | -0.455 | Destabilizing | 0.822 | D | 0.659 | neutral | N | 0.489450267 | None | None | I |
S/V | 0.6377 | likely_pathogenic | 0.6377 | pathogenic | -0.253 | Destabilizing | 0.956 | D | 0.649 | neutral | None | None | None | None | I |
S/W | 0.8632 | likely_pathogenic | 0.8728 | pathogenic | -0.928 | Destabilizing | 0.998 | D | 0.738 | prob.delet. | None | None | None | None | I |
S/Y | 0.716 | likely_pathogenic | 0.7401 | pathogenic | -0.665 | Destabilizing | 0.993 | D | 0.665 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.