Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26417 | 79474;79475;79476 | chr2:178566883;178566882;178566881 | chr2:179431610;179431609;179431608 |
N2AB | 24776 | 74551;74552;74553 | chr2:178566883;178566882;178566881 | chr2:179431610;179431609;179431608 |
N2A | 23849 | 71770;71771;71772 | chr2:178566883;178566882;178566881 | chr2:179431610;179431609;179431608 |
N2B | 17352 | 52279;52280;52281 | chr2:178566883;178566882;178566881 | chr2:179431610;179431609;179431608 |
Novex-1 | 17477 | 52654;52655;52656 | chr2:178566883;178566882;178566881 | chr2:179431610;179431609;179431608 |
Novex-2 | 17544 | 52855;52856;52857 | chr2:178566883;178566882;178566881 | chr2:179431610;179431609;179431608 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs369019463 | 0.084 | 0.014 | N | 0.192 | 0.034 | 0.170165803431 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.24E-05 | 0 |
E/D | rs369019463 | 0.084 | 0.014 | N | 0.192 | 0.034 | 0.170165803431 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
E/D | rs369019463 | 0.084 | 0.014 | N | 0.192 | 0.034 | 0.170165803431 | gnomAD-4.0.0 | 8.67713E-05 | None | None | None | None | I | None | 4.00588E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14439E-04 | 0 | 3.20307E-05 |
E/Q | None | None | 0.942 | N | 0.546 | 0.262 | 0.238096912614 | gnomAD-4.0.0 | 2.05291E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7337E-04 | 8.99549E-07 | 0 | 1.657E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2674 | likely_benign | 0.2736 | benign | -0.353 | Destabilizing | 0.489 | N | 0.625 | neutral | N | 0.491527061 | None | None | I |
E/C | 0.93 | likely_pathogenic | 0.9301 | pathogenic | -0.11 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | I |
E/D | 0.0971 | likely_benign | 0.1062 | benign | -0.311 | Destabilizing | 0.014 | N | 0.192 | neutral | N | 0.513902488 | None | None | I |
E/F | 0.934 | likely_pathogenic | 0.9371 | pathogenic | -0.199 | Destabilizing | 0.978 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/G | 0.34 | likely_benign | 0.3487 | ambiguous | -0.544 | Destabilizing | 0.698 | D | 0.639 | neutral | N | 0.475651653 | None | None | I |
E/H | 0.7271 | likely_pathogenic | 0.7397 | pathogenic | 0.134 | Stabilizing | 0.998 | D | 0.549 | neutral | None | None | None | None | I |
E/I | 0.6608 | likely_pathogenic | 0.6862 | pathogenic | 0.117 | Stabilizing | 0.956 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/K | 0.3868 | ambiguous | 0.4136 | ambiguous | 0.317 | Stabilizing | 0.822 | D | 0.59 | neutral | N | 0.506091082 | None | None | I |
E/L | 0.6857 | likely_pathogenic | 0.6966 | pathogenic | 0.117 | Stabilizing | 0.956 | D | 0.626 | neutral | None | None | None | None | I |
E/M | 0.7265 | likely_pathogenic | 0.7383 | pathogenic | 0.139 | Stabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/N | 0.3534 | ambiguous | 0.3648 | ambiguous | -0.026 | Destabilizing | 0.86 | D | 0.57 | neutral | None | None | None | None | I |
E/P | 0.4208 | ambiguous | 0.4362 | ambiguous | -0.02 | Destabilizing | 0.978 | D | 0.634 | neutral | None | None | None | None | I |
E/Q | 0.2895 | likely_benign | 0.2883 | benign | 0.014 | Stabilizing | 0.942 | D | 0.546 | neutral | N | 0.509208745 | None | None | I |
E/R | 0.5671 | likely_pathogenic | 0.5776 | pathogenic | 0.568 | Stabilizing | 0.956 | D | 0.565 | neutral | None | None | None | None | I |
E/S | 0.3158 | likely_benign | 0.3172 | benign | -0.189 | Destabilizing | 0.076 | N | 0.313 | neutral | None | None | None | None | I |
E/T | 0.4046 | ambiguous | 0.4195 | ambiguous | -0.029 | Destabilizing | 0.076 | N | 0.37 | neutral | None | None | None | None | I |
E/V | 0.4329 | ambiguous | 0.4568 | ambiguous | -0.02 | Destabilizing | 0.942 | D | 0.605 | neutral | N | 0.4882225 | None | None | I |
E/W | 0.9799 | likely_pathogenic | 0.9805 | pathogenic | -0.042 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | I |
E/Y | 0.868 | likely_pathogenic | 0.8742 | pathogenic | 0.047 | Stabilizing | 0.993 | D | 0.695 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.