Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26418 | 79477;79478;79479 | chr2:178566880;178566879;178566878 | chr2:179431607;179431606;179431605 |
N2AB | 24777 | 74554;74555;74556 | chr2:178566880;178566879;178566878 | chr2:179431607;179431606;179431605 |
N2A | 23850 | 71773;71774;71775 | chr2:178566880;178566879;178566878 | chr2:179431607;179431606;179431605 |
N2B | 17353 | 52282;52283;52284 | chr2:178566880;178566879;178566878 | chr2:179431607;179431606;179431605 |
Novex-1 | 17478 | 52657;52658;52659 | chr2:178566880;178566879;178566878 | chr2:179431607;179431606;179431605 |
Novex-2 | 17545 | 52858;52859;52860 | chr2:178566880;178566879;178566878 | chr2:179431607;179431606;179431605 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1382272786 | -1.613 | 0.993 | N | 0.387 | 0.269 | 0.599423059063 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1382272786 | -1.613 | 0.993 | N | 0.387 | 0.269 | 0.599423059063 | gnomAD-4.0.0 | 1.3686E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.04414E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9861 | likely_pathogenic | 0.9871 | pathogenic | -2.452 | Highly Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | I |
I/C | 0.9877 | likely_pathogenic | 0.9894 | pathogenic | -1.564 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
I/D | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -2.491 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
I/E | 0.9974 | likely_pathogenic | 0.9971 | pathogenic | -2.359 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | I |
I/F | 0.9494 | likely_pathogenic | 0.954 | pathogenic | -1.579 | Destabilizing | 1.0 | D | 0.826 | deleterious | D | 0.542476494 | None | None | I |
I/G | 0.9975 | likely_pathogenic | 0.9975 | pathogenic | -2.916 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
I/H | 0.9984 | likely_pathogenic | 0.9984 | pathogenic | -2.236 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
I/K | 0.9964 | likely_pathogenic | 0.9959 | pathogenic | -1.807 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
I/L | 0.5477 | ambiguous | 0.5968 | pathogenic | -1.153 | Destabilizing | 0.993 | D | 0.405 | neutral | N | 0.485846324 | None | None | I |
I/M | 0.6096 | likely_pathogenic | 0.628 | pathogenic | -0.9 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.545011389 | None | None | I |
I/N | 0.9749 | likely_pathogenic | 0.9734 | pathogenic | -1.879 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.552773297 | None | None | I |
I/P | 0.9872 | likely_pathogenic | 0.9838 | pathogenic | -1.563 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | I |
I/Q | 0.9972 | likely_pathogenic | 0.9973 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
I/R | 0.9956 | likely_pathogenic | 0.995 | pathogenic | -1.3 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
I/S | 0.99 | likely_pathogenic | 0.9909 | pathogenic | -2.556 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.552012828 | None | None | I |
I/T | 0.9791 | likely_pathogenic | 0.9816 | pathogenic | -2.299 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.527160623 | None | None | I |
I/V | 0.1598 | likely_benign | 0.1901 | benign | -1.563 | Destabilizing | 0.993 | D | 0.387 | neutral | N | 0.520639246 | None | None | I |
I/W | 0.9985 | likely_pathogenic | 0.9984 | pathogenic | -1.875 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
I/Y | 0.9926 | likely_pathogenic | 0.9924 | pathogenic | -1.632 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.